Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0875 ATGGCAAGACTGGCGGCAATCCAAGAGCACCTACTATCTTGCTCTCCCTTGACCCCCTCTCTTTCTGACTTAAGTGGAACCAGACTTCATACTCAACATCAGTTGAAGAGAAAATTATGGCAGCAAAAAGGCACTCTTTATGTATCCGCATCAAGCACCAAGAAAATCTTCAACATGGGAGGCATCAGATTTATTGGAGTGTTTTTGTCTAGGCTCCTTGTCAAAGAGGGTCACCGAGTGACTTTATTTACAAGAGGTAAAGCGCCTGTCACTCAACAATTGCCAGGTGAATCAGACGGTGATTATGCTGTTTTTTCTTCCAAGATCTTGCATTCGAAAGGTGACAGAAAGGACTTTGAATTTGAAAAATCCAGTCTCTCAGCAGAGGAGTTTGATGTTATTTGCGTAAATGGACGTGAGGCAGACGAAGTTGAGCCTGTATTTGATGCTCTGCCTAATCTGGAACAAGTTTCTAGAAGGAAAGCAGCGTCTTTGATCTTATCAACCTACATTCTCTCAAAGGTCGGCATAGCACTGGCTCAGCAGTCTCCTGTGTTCCGGGAATACATAGATGCATTTGATGGTTATTCATTCCAGTACCCAAGGAGTTGGATTCAAGTCCGTGGTGCTGGGGCTGACATATTCTTCAGGGACCCTTATGTTCTTGATGAAAATCTCTCTCTTGAAATTTCTTCACCTTCATCCTCCCAATACAAGAGTGTTGAAGACTTGGGTCCACCCCAAGAAGCTGGAAAGAAAGTTCTCAAACAATATCTGACTGAGTTTATGTCTACTAGACTCGGTGTTAGACGTGAATCAAATATTCTTTCGACTTCTTCAAGAGTAGCTGATGATGGCAAGTTGTACTATGAAGTTGAGGTAAACATCAAGTCATATGCAAACAACAATGAACTTGCTGTTATGCCACAAGACCGGGTGGCTCGTCTGGAATGGGACCGGAGGTACCTATCTGTTCTTGGAGTTGAAAACAACCAACTGTATGAGTTGAGATTGCAGGTGCCGGAAAATGTGTTTGCAGAGGAGGAAAGTGATCTTCGTAGAGTCATGGATTCGTTTCGAGTGAGCAAGATTGCTGCTTAG 1101 0.4342 MARLAAIQEHLLSCSPLTPSLSDLSGTRLHTQHQLKRKLWQQKGTLYVSASSTKKIFNMGGIRFIGVFLSRLLVKEGHRVTLFTRGKAPVTQQLPGESDGDYAVFSSKILHSKGDRKDFEFEKSSLSAEEFDVICVNGREADEVEPVFDALPNLEQVSRRKAASLILSTYILSKVGIALAQQSPVFREYIDAFDGYSFQYPRSWIQVRGAGADIFFRDPYVLDENLSLEISSPSSSQYKSVEDLGPPQEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRVADDGKLYYEVEVNIKSYANNNELAVMPQDRVARLEWDRRYLSVLGVENNQLYELRLQVPENVFAEEESDLRRVMDSFRVSKIAA* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0875 366 Pfam PsbP 186 361 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Vra3g0875 366 PANTHER - 141 365 - -
Vra3g0875 366 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 180 361 - -
Vra3g0875 366 PANTHER PSBP DOMAIN-CONTAINING PROTEIN 1, CHLOROPLASTIC 141 365 - -
Vra3g0875 366 SUPERFAMILY Mog1p/PsbP-like 187 361 IPR016123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0875 Vra-Chr3 8857111 8861144 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0875 - - vra:106757660 682.559