Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0873 ATGGCAAGAATGGTGGCACTCCAACAGAACCAACTATCTTTCTCTCCCTTGGCCTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCATACTCAACTTCAGTTGAAGAGAAAATTATGGCAGCCAAAAGGGTCTTTCTCTGTCTCTGCATCAAGCACCAAGAAAATCCTCATCATGGGAGGCACCAGGTTTATTGGAGTGTTTTTGTCTAGGCTCCTTGTCAAAGAAGGACACCAGGTGACTTTATTTACCAGAGGTAAAGCGCCTGTCACTCAACAATTGCCTGGTGAATCAGACGGTGATTATGCTGATTTTTCTTCCAAGATCTTGCATTTGAAAGGAGACAGGAAGGACTATGAATTTGTAAAATCCAGTCTGTCAGCAGAGGGGTATGATGTTGTTTATGACATAAATGGACGAGAGGCAGATGAAGTTGAGCCCATACTGGATGCTCTGCCTAATCTGGAACAGTTTATTTACTGTTCTTCGGCTGGTGTCTATCTCAAATCTGACCTATTACCTCATGCAGAGACTGATGCAGTTGATCCTAAGAGTAGGCACAAGGGAAAGCTTGAGACAGAAAGTTTGCTACAATCAAAGGGTGTTAATTGGACATCAATAAGGCCAGTTTACATCTATGGACCCTTGAACTACAACCCTGTTGAAGAGTGGTTCTTCCATAGATTGAAAGCTGGTCGCCCAATTCCTATCCCTAGCTCAGGAATACAAATAACACAACTTGGTCATGTTAAGGATTTGGCAACAGCTTTCGTTCAGGTTCTTGGTAATGACAAGGCCAGCAAGGAAGTATTTAACATCTCGGGAGAGAAATATGTTACATTTGATGGATTAGCAAGAGCGTGTGCTAAGGCTGGTGGATTCCCAGAGCCAGAGATCGTTCACTACAACCCTAAAGATTTTGATTTTGGGAAAAAGAAGTCATTTCCATTCCGTGACCAGCATTTCTTTGCATCGATTGAGAAAGCAAAGAGAGTACTTGGGTGGGAACCTGAATTTGACCTTGTAGAAGGTCTTGCAGACTCCTATAACCTGGACTTTGGTAGAGGAACATTCCGGAAAGAGGCTGATTTCTCAACAGATGACATTATTCTTGGCAAGAGTCTTGTTAGTGTATAA 1137 0.4283 MARMVALQQNQLSFSPLASSLSDFSGTRLHTQLQLKRKLWQPKGSFSVSASSTKKILIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESDGDYADFSSKILHLKGDRKDYEFVKSSLSAEGYDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHAETDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPSSGIQITQLGHVKDLATAFVQVLGNDKASKEVFNISGEKYVTFDGLARACAKAGGFPEPEIVHYNPKDFDFGKKKSFPFRDQHFFASIEKAKRVLGWEPEFDLVEGLADSYNLDFGRGTFRKEADFSTDDIILGKSLVSV* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0873 378 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 54 350 IPR036291 -
Vra3g0873 378 PANTHER UDP-GLUCOSE 4-EPIMERASE 51 371 - -
Vra3g0873 378 Pfam NAD dependent epimerase/dehydratase family 56 273 IPR001509 -
Vra3g0873 378 PANTHER UDP-GLUCOSE 4-EPIMERASE 51 371 - -
Vra3g0873 378 Gene3D - 51 351 - -
Vra3g0873 378 CDD SDR_a1 54 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0873 Vra-Chr3 8848847 8852809 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0873 - - gmx:100799721 726.472