Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0867 ATGGGTTCTGAAGGTCCAACAACACCCATAACAACAATTCATGTGACAGGATTTAAGAAATTCCATGGAGTTGCTGAGAATCCGACCGAAACAATTGTCAATAATTTGGCAGAGTACATGAATAAGAAGGGTTTGCCAAAGGGTTTAGTTATTGGGAGCTGCAGCATTCTTGAAACTGCTGGTCAAGGAGCACTTGTTTCACTGTACCAGAGATTGCAATCCGCTGTTATTTCCAAGGATTCTGAATCTTCAAATTCCAATAGAACTATTTGGCTGCATTTTGGGGTTAACAGTGGTGCAACACGGTTTGCTATAGAGAACCAGGCAGTCAATGAGGCTAATTTTCGATGTCCGGATGAAATGGGTTGGAAGCCCCAGAAAGTCCCCATTGTTCCTTCGGACGGTGGAATTTCACGAACAAGGGAGACTTCACTCCCTGTAGTGGAGATCACAAAAGCCTTGGCAGAAAAGGGGTACGAAGTTATGGTATCAGATGATGCAGGCAGGTTCGTGTGCAATTACGTTTACTATCACTCCCTTCGCTTTGCCGAGCAGAATGGAATCAAATCCCTTTTCGTGCACGTGCCACTCTTCCTCATAATAAATGAAGAGACTCAAATGAAATTCGTTGCTTCCTTGTTAGAGGTTCTTGCCTCTAAATCTTAG 666 0.4354 MGSEGPTTPITTIHVTGFKKFHGVAENPTETIVNNLAEYMNKKGLPKGLVIGSCSILETAGQGALVSLYQRLQSAVISKDSESSNSNRTIWLHFGVNSGATRFAIENQAVNEANFRCPDEMGWKPQKVPIVPSDGGISRTRETSLPVVEITKALAEKGYEVMVSDDAGRFVCNYVYYHSLRFAEQNGIKSLFVHVPLFLIINEETQMKFVASLLEVLASKS* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0867 221 CDD Peptidase_C15 12 219 IPR000816 GO:0005829|GO:0006508|GO:0016920
Vra3g0867 221 Gene3D - 10 220 IPR036440 -
Vra3g0867 221 SUPERFAMILY Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) 12 218 IPR036440 -
Vra3g0867 221 PIRSF Pyrrolidone-crbxlat_pptds 10 221 IPR000816 GO:0005829|GO:0006508|GO:0016920
Vra3g0867 221 PANTHER BNAA09G15240D PROTEIN 1 219 - -
Vra3g0867 221 PANTHER PROTEASE FAMILY C15 PYROGLUTAMYL-PEPTIDASE I-RELATED 1 219 IPR016125 -
Vra3g0867 221 Pfam Pyroglutamyl peptidase 13 197 IPR016125 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0867 Vra-Chr3 8799888 8802994 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0867 K01304 - gmx:100789152 414.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0867 3 8799888 8802994 Vra8g1403 8 30895956 30899352 PCT