Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0840 ATGTCGCAGATACTGAAGGAGCCGGAGCAGGTGATGAAGATGAGAGGAGGAGGTGTGTTGGGGAAGAGAACGATTCTCAAGAGCGACCATTTCCCTGGTTGCCAGAACAAGCGTTTGTCGCCTCAGATCGAAGGCGCTCCCAATTATCGTCAGGCATCGGACTCGTTGCATGTTCACGGTGTTGCCATTCCAACCATTGATGGAATTCGGAACGTTCTCAACCACATTGGTGCTGGATTGAAAGTTCTCTGGATTAGCCTTCGTGAGGAACCGCTTGCCTACATTAATGGTCGTCCTTTTGTTTTGCGTGATGTGGAGAGGCCGTTCTCCAACCTTGAGTATACGGGAATTAACAGAGAAAGGGTTGAGCAAATGGAAGCTCGTTTGAAAGAAGACATCCTGGTGGAGGCAGCAAGATATGGAAATAAGATTCTTGTGACTGATGAACTGCCAGATGGGCAGATGGTGGACCAATGGGAGCCGGTGTCATGTGATTCTGTGAAGACACCACTAGAGGTGTATGAGGAATTGCAAGTAGCGGGATATCTTGTTGATTATGAACGCGTTCCTATAACTGATGAAAAGTCACCGAAGGAAATGGATTTTGATATTTTGGTTAATAAAATTTCTCAAGCTGATGTAGACACGGAGATAATTTTTAATTGTCAAATGGGGCGTGGTCGAACCACAACTGGAATGGTCATTGCAACTTTGGTCTACCTCAACAGAATAGGAGCCTCTGGGTTTCCAAGAAGCAATTCCATTGGGAGAATTTTTCAAAGTATGACCAATGTTGCTGATCATTTGCCTGACACGGAAGAAGCAATTCGCAGAGGAGAGTATGCAGTCATTAGAAGTTTGATTCGGGTGTTAGAGGGTGGTGTTGAGGGGAAAAGACAAGTGGACAAAGTCATTGACAAATGTGCTTCAATGCAGAACCTGCGTGAAGCAATTGCCACTTATCGCAATAGTATTTTGCGGCAGCCTGATGAGATGAAAAGGGAAGCATCACTATCATTTTTTGTTGAGTACCTGGAGAGATACTACTTTTTAATATGTTTTGCTGTGTACATTCATTCAGAAAGGGCTGCACTCCGTTCTAATACTACTGATAACTGTAGCTTTGCTGACTGGATGAGAGCAAGGCCTGAACTCTACAGCATTATTCGCAGGTTACTTAGGAGAGATCCAATGGGTGCACTTGGTTATTCAAGTTTGAAACCATCTCTAAAGATGATAGCCGAATCAACTGATGGCCGCCCTTCTGAGATGGGTGTGGTTGCTGCCTTGAGAAATGGCGAGGTTCTTGGTAGTCAAACTGTTCTCAAGAGTGATCACTGTCCTGGATCCCAAAACCCAAGTTTACTTGAGAGTGTGGATGGTGCTCCTAATTTCCGAGAAGTTCCTGGGTTTCCAGTTTATGGAGTGGCAAATCCAACAATTGATGGTATTCGATCTGTCATCAGGAGGATTGGAAGTTCTAAAGGTGGACGCCCAGTACTTTGGCATAATATGAGAGAAGAGCCTGTTATTTACATCAATGGGAAGCCATTTGTTCTTCGTGAAGTTGAAAGGCCATACAAAAACATGTTGGAGTACACGGGCATTGACCGTGAAAGAGTGGAGAAAATGGAAGCCCGATTAAAAGAAGATATCCTAAGAGAAGCTAAACACTATGGTGGTGCCATAATGGTTATTCATGAAACAGATGATAAACATATATTTGATGCTTGGGAGTTGGTTACCCCTGATGTAATTCAAACCCCACTTGAAGTTTTCAAAAGTCTGGAAGCTGAGGGATTCCCTGTTAAGTATGCACGTGTGCCCATCACTGATGGAAAAGCTCCTAAAAGCTCTGATTTTGACACTTTGGCAATTAATATATCTTCTGCTGCCAAGGACACTGCTTTTGTTTTCAATTGCCAGATGGGCAGGGGCAGGACAACCACTGGTACTGTCATAGCTTGCCTTGTGAAACTTCGAATCGATTATGGTAGGCCCATTAAAATACTGGGTGATGATGTGACCTGTGAAGAATCGGACTGTGGTTCTTCAAGTGGAGATGAAGCTGGGACTTATACCACTTCATTAACCTCAAATGCTTTGTCAAGAAAGACAGACGAGAAACAAAATCGTGCTTTTGGTATAAATGACATTCTTTTGTTATGGAAGATAACAACATTATTTGATCATGGTGTTGAATGCCGAGAGGCATTAGATGCTATCATTGATAGATGTTCTGCACTTCAAAATATTCGCCAAGCAGTCTTGCAGTATAGAAAAGTATTCAATCAACAGCATGTTGAGCCTAGGGTAAGGAGGGTGGCATTGAATCGTGGTGCTGAGTACTTGGAGCGGTACTTTCGTCTAATTGCTTTTGCAGCATATCTTGGAAGTGAAGCATTTGATGGATTTTGTGGACAAGGAGAATCGAGAATGACATTTAAGGTTTGGTTGCATCAAAGGCCTGAGGTGCAGGCTATGAAATGGAGCATCAGATTAAGACCGGGGCGTTTTTTCACTGTCCCTGAGGAGTTGAGAGAGCCACAAGAGTCTCAACATGGAGATGCTGTGATGGAGGCCATTGTCAAGGCCAGAAATGGTTCTGTTTTGGGGAAAGGCTCCATTCTGAAAATGTATTTCTTTCCTGGTCAGAGAACTTCCAGTCATATACAAATTCATGGCGCACCTCATGTTTTCAAGGTTGATGAATACCCTGTGTATTGCATGGCAACTCCAACCATCTCTGGTGCCAAAGAGATGCTAGACTATTTGGGTGCTAAGCCTAAACCTTCATTCATTGCTCAAAAGGTTGTGTTGACTGATCTGAGAGAAGAGGCAGTTGTTTATATCAATTATACTCCCTTTGTCCTTAGGGAGTTAAACAAACCAGTTAATACGCTCAAGTACGTGGGAATCACGGGTCCTGTGGTGGAACACATGGAAGCACGGCTAAAAGAAGATATACTAGCTGAGATTAGACAATCAGGTGGGCGAATGCTGTTACACCGTGAAGAATATAACCCCTCCACAAATCAGTCAGGTGTGGTTGGATACTGGGAAAACATTCGAGCAGATGATGTGAAGACACCTGCGGAAGTTTATTCTGCTCTGAAAGATGATGGATATGATATTGTCTACCAGAGGATACCTTTAACAAGAGAGAGAGATGCTTTGGCTTCTGATATTGATGCAATACAGTATTGTCAAGATGACTCTGCAGGTAGTTACCTTTTTGTATCACACACAGGTTTTGGTGGTGTCGCATATGCAATGGCCATAATCTGTATCCGACTTGATGCTGGATCCAAAGTTTCACAACCATTATTCGGACCTCATATATATGCAGTGACTGAAGAGAACTTGCCTTCTCAAGCTTCCAATGAAACGGCACTAAGTATGGGTGACTATAGTGACATTTTGAACCTTACAAGGGTCCTCATACATGGTCCGCAAAGCAAAGCAGACGTTGACCTTGTCATTGAAAGATGTGCAGGTGCAGGGCATATAAGAGAAGATATTCTATATTACAAAAGAGAATTTGAGAAGTTCACTGATGATGATGATGAGGAACGAGCATGTCTTATGGACATGGGTATCAAAGCTTTGAGGCGATATTTTTTCCTTATCACTTTCAGATCTTATCTCTACTGCACTTCTCCTGCCAATGTGAAATTTGCATCATGGATGGACGCAAGACCAGAGCTTGGTCATCTATGTAACAATCTAAGAATTGATAAATAA 3744 0.4298 MSQILKEPEQVMKMRGGGVLGKRTILKSDHFPGCQNKRLSPQIEGAPNYRQASDSLHVHGVAIPTIDGIRNVLNHIGAGLKVLWISLREEPLAYINGRPFVLRDVERPFSNLEYTGINRERVEQMEARLKEDILVEAARYGNKILVTDELPDGQMVDQWEPVSCDSVKTPLEVYEELQVAGYLVDYERVPITDEKSPKEMDFDILVNKISQADVDTEIIFNCQMGRGRTTTGMVIATLVYLNRIGASGFPRSNSIGRIFQSMTNVADHLPDTEEAIRRGEYAVIRSLIRVLEGGVEGKRQVDKVIDKCASMQNLREAIATYRNSILRQPDEMKREASLSFFVEYLERYYFLICFAVYIHSERAALRSNTTDNCSFADWMRARPELYSIIRRLLRRDPMGALGYSSLKPSLKMIAESTDGRPSEMGVVAALRNGEVLGSQTVLKSDHCPGSQNPSLLESVDGAPNFREVPGFPVYGVANPTIDGIRSVIRRIGSSKGGRPVLWHNMREEPVIYINGKPFVLREVERPYKNMLEYTGIDRERVEKMEARLKEDILREAKHYGGAIMVIHETDDKHIFDAWELVTPDVIQTPLEVFKSLEAEGFPVKYARVPITDGKAPKSSDFDTLAINISSAAKDTAFVFNCQMGRGRTTTGTVIACLVKLRIDYGRPIKILGDDVTCEESDCGSSSGDEAGTYTTSLTSNALSRKTDEKQNRAFGINDILLLWKITTLFDHGVECREALDAIIDRCSALQNIRQAVLQYRKVFNQQHVEPRVRRVALNRGAEYLERYFRLIAFAAYLGSEAFDGFCGQGESRMTFKVWLHQRPEVQAMKWSIRLRPGRFFTVPEELREPQESQHGDAVMEAIVKARNGSVLGKGSILKMYFFPGQRTSSHIQIHGAPHVFKVDEYPVYCMATPTISGAKEMLDYLGAKPKPSFIAQKVVLTDLREEAVVYINYTPFVLRELNKPVNTLKYVGITGPVVEHMEARLKEDILAEIRQSGGRMLLHREEYNPSTNQSGVVGYWENIRADDVKTPAEVYSALKDDGYDIVYQRIPLTRERDALASDIDAIQYCQDDSAGSYLFVSHTGFGGVAYAMAIICIRLDAGSKVSQPLFGPHIYAVTEENLPSQASNETALSMGDYSDILNLTRVLIHGPQSKADVDLVIERCAGAGHIREDILYYKREFEKFTDDDDEERACLMDMGIKALRRYFFLITFRSYLYCTSPANVKFASWMDARPELGHLCNNLRIDK* 1248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0840 1247 Gene3D Protein tyrosine phosphatase superfamily 25 276 IPR029021 -
Vra3g0840 1247 Gene3D Protein tyrosine phosphatase superfamily 438 670 IPR029021 -
Vra3g0840 1247 Gene3D Protein tyrosine phosphatase superfamily 878 1108 IPR029021 -
Vra3g0840 1247 CDD PTP_paladin 431 746 - -
Vra3g0840 1247 PANTHER METAL ION-BINDING PROTEIN 340 481 - -
Vra3g0840 1247 PANTHER METAL ION-BINDING PROTEIN 423 601 - -
Vra3g0840 1247 PANTHER METAL ION-BINDING PROTEIN 1 336 - -
Vra3g0840 1247 PANTHER METAL ION-BINDING PROTEIN 602 1247 - -
Vra3g0840 1247 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 861 1086 IPR029021 -
Vra3g0840 1247 CDD PTP_paladin 15 308 - -
Vra3g0840 1247 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 423 601 - -
Vra3g0840 1247 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 340 481 - -
Vra3g0840 1247 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 1 336 - -
Vra3g0840 1247 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 602 1247 - -
Vra3g0840 1247 Pfam Inositol hexakisphosphate 942 1097 - -
Vra3g0840 1247 Pfam Inositol hexakisphosphate 85 239 - -
Vra3g0840 1247 Pfam Inositol hexakisphosphate 503 659 - -
Vra3g0840 1247 SMART PTPlike_phytase_2 503 659 - -
Vra3g0840 1247 SMART PTPlike_phytase_2 941 1099 - -
Vra3g0840 1247 SMART PTPlike_phytase_2 85 240 - -
Vra3g0840 1247 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 427 660 IPR029021 -
Vra3g0840 1247 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 9 244 IPR029021 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0840 - - gmx:100788460 2363.96