Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0837 ATGAAAATCTTAGAGGCCAATGCTGGTGTACTCACAAATTTTGAGGTCCTTGATTTCTTCCGAGCTAAAGGAGCTTCAAAGGATCCAACAAGGGTTATTGCCAAAGTAGCGCACTCTGAATACAAGGTTTATGATTATTTGGTTGACACTGCTGCCTCTGATCAAACAAGAGAGAGCATAGATGAGTTTTTGACAAGCATTAAACGGCATGACCTAGCTAAAGCTGAGGTTCTGAACATATTGAACACTAGGCCAGCTGCTGAAGTTGAAATATTCCCTATCATAGAGAATTGTGAGGGGCGTTTTCCAGATGAAGAGAAAGAGGTAACCGAAATAGTTGATCTGGTGACGAAAACATTACCACCACCTCCCAATATGAAGCACGAAGAAATCAACAAGGGTGATGAAGAAACTGCTACACTGAAAAATGAAAAGGATGAAATTAGTAAAGATCCAATGGACAAAATATAA 471 0.397 MKILEANAGVLTNFEVLDFFRAKGASKDPTRVIAKVAHSEYKVYDYLVDTAASDQTRESIDEFLTSIKRHDLAKAEVLNILNTRPAAEVEIFPIIENCEGRFPDEEKEVTEIVDLVTKTLPPPPNMKHEEINKGDEETATLKNEKDEISKDPMDKI* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0837 156 MobiDBLite consensus disorder prediction 118 156 - -
Vra3g0837 156 MobiDBLite consensus disorder prediction 128 156 - -
Vra3g0837 156 Pfam RNA polymerase Rpb4 31 119 IPR005574 GO:0006352|GO:0030880
Vra3g0837 156 Gene3D - 1 121 IPR038324 -
Vra3g0837 156 PANTHER CALCITONIN GENE-RELATED PEPTIDE-RECEPTOR COMPONENT PROTEIN 1 140 IPR038846 GO:0005666|GO:0006384
Vra3g0837 156 SUPERFAMILY HRDC-like 4 121 IPR010997 GO:0000166|GO:0044237
Vra3g0837 156 SMART rpol4neu2 1 123 IPR006590 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0837 Vra-Chr3 8504787 8507981 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0837 K25304 - gmx:100789488 224.557