Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0834 ATGGATGCTTCTTGCGGGATTGCTGGATTCAAGTATGATTGCTTGCTTTTCGATATGGACGATACTCTTTACCCATTGAGCTCAGGTCTCAATTTGGCATGTCGGAAGAACATAGAAGAGTACATGATAAAACACTTGCATATGGAAGAAAGTGAAGTACCAAAGATTTGCCTGGACTTCTACAAGGAATATGGGACAACTATGGCAGGACTAAAGGCCTTTGGTTATGAATTTGATAATGATGAATTTCATGCCTACGTGCATGGAAGACTACCATACTGGAAACTGAAGCCAGATCCAGTGTTAAGGAACCTTCTGCTTTCCATGCCTCAGCGTAAAATAGTTTTCACTAATGCAGATGAGGCTCATGCACACCGACTGCTCAACAGATTGGGCTTGATAGAATGTTTTGATAGTATCATATGCTTTGAAACGCTTAATCCTCCTGATCACACAGATGTACCAACTGATAATCGCGTGTTAGCATGGAGCAACTGTAACTCGTTGAACAAAGAAGATTGTAACCAGGTAGAGAGTGAATGCTTTAACTCCAAGATACAAATCCTCTGCAAACCCTCTGTTGAAGCCATTGAAGCTGCCATTCAGATTGCTAATGTAGACCCAAGGAAAACGTTGTTTTTTGATGACAGTCCTAGAAACATTGCAAGTGGGAAAGCTGCTGGACTTAACACAGTTATTGTGGGACGCTCAGATTTGGTGCCGGGAGCTGACCATGCACTGAACAGCATTCATAACATCAAAGAAGCGTTACCCGAGATATGGGAAGTTGAGGGAGACCACCAGCAAATGATCCAATCTCAAGCAGTTGAAACCATGGTCCTTGCATAG 849 0.4264 MDASCGIAGFKYDCLLFDMDDTLYPLSSGLNLACRKNIEEYMIKHLHMEESEVPKICLDFYKEYGTTMAGLKAFGYEFDNDEFHAYVHGRLPYWKLKPDPVLRNLLLSMPQRKIVFTNADEAHAHRLLNRLGLIECFDSIICFETLNPPDHTDVPTDNRVLAWSNCNSLNKEDCNQVESECFNSKIQILCKPSVEAIEAAIQIANVDPRKTLFFDDSPRNIASGKAAGLNTVIVGRSDLVPGADHALNSIHNIKEALPEIWEVEGDHQQMIQSQAVETMVLA* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0834 282 Gene3D - 73 261 IPR023214 -
Vra3g0834 282 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 182 234 IPR006439 -
Vra3g0834 282 CDD HAD_5NT 14 236 IPR010237 -
Vra3g0834 282 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 8 282 - -
Vra3g0834 282 PANTHER OS07G0634400 PROTEIN 8 282 - -
Vra3g0834 282 SUPERFAMILY HAD-like 11 259 IPR036412 -
Vra3g0834 282 SFLD C1.5.3: 5'-Nucleotidase Like 12 263 IPR010237 -
Vra3g0834 282 SFLD Haloacid Dehalogenase 12 263 - -
Vra3g0834 282 TIGRFAM Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 13 234 IPR010237 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0834 Vra-Chr3 8479390 8482418 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0834 K18551 - gmx:100786323 499.204