Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0814 ATGAGATTTCGTGGGAGCTTTATTTTTCGCCGTTTTCTTTCTCAGTTTCGAAAGCAATTCGATTCAAAATCAGAATTCCCACTTCCGAGTTTCCGGCGTCGAGCTCCGTTCTTCCTTCGTTCTTATTCTTCCGAACTGCAAGGTCAACTGTCGCCTGAACTCTTGAACATAATGGAACAAAGACTCTCCGCAATTGAGTACCGGACTGCATGTCTCAACAAATTTCTAAATCAGCCAGAAGCATCGCCATCAGAATATGCAAGAGCTAACAAGGAGCTTCGGAAGCTAAGTGGTTCTGTGGACCTTATTAATGAATTGAGGACCAAACAGAAGGAAATTGATGGCTTGAAGTCACTGATGACCGAATGTTCTGAGGATAAAGACATGCTAAATATGGCTACAGAGGAAATGGGTCAGGCCATAGAAGAAGAAAGAAGACTGCAAAATTTGCTGCTGAAGTCATTACTTCCTAAGGATGATGCTAATGAAAGGGATTGCATTTTGGAGGTACGAGCAGGCACTGGAGGGGAGGAGGCTTCCCTGTTTGCAATGGATATCTTTAGAATGTATGAGAAGTATGCTCTCAAGAAAGGCTGGAAATTTGAAGTAGTAGATATAGCTCAATCTGATCTGAAAGGTTACAAGGAGGCTAGTGCAGCAATTGCAGGAGTTGGTGTTTATGGGAAACTAAAATTTGAGAGTGGAATCCATCGTGTCCAGCGAGTTCCTGTGACAGAAAAGTCAGGACGAATTCATACCAGTGCTGTTTCTGTTGCAATTCTTCCTCAGGCTGATGAGGTAGATGTTCAATTGAAGAATGAAGACTTAAGAATCGACACCTATAGATCTGGTGGTTCAGGCGGTCAGCATGCAAATACAACGAACAGTGCTGTTAGAGTAACCCACATTCCAACAGGGATTATGATTACTATACAAGATGAGCGGTCTCAACATATGAACAAGGCCAAAGCTCTCAAGGTACTCTGTGCAAAACTATATGAAATGGAAAGGCTAAGACTTCATAGAAGTCGATCAAAGCTTCGATCTGAGCAGATTGGTAGTGGGGACAGATCTGAACGCATCAGAACATACAATTTTCCTCAGGGCCGGGTAACTGATCACAGAGTTGGTATCACTTATCACTCGGTAGATGATGTGATGCAAGGCAGTTAG 1173 0.4297 MRFRGSFIFRRFLSQFRKQFDSKSEFPLPSFRRRAPFFLRSYSSELQGQLSPELLNIMEQRLSAIEYRTACLNKFLNQPEASPSEYARANKELRKLSGSVDLINELRTKQKEIDGLKSLMTECSEDKDMLNMATEEMGQAIEEERRLQNLLLKSLLPKDDANERDCILEVRAGTGGEEASLFAMDIFRMYEKYALKKGWKFEVVDIAQSDLKGYKEASAAIAGVGVYGKLKFESGIHRVQRVPVTEKSGRIHTSAVSVAILPQADEVDVQLKNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGIMITIQDERSQHMNKAKALKVLCAKLYEMERLRLHRSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITYHSVDDVMQGS* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0814 390 SMART PCRF_a_2 118 233 IPR005139 GO:0006415
Vra3g0814 390 Gene3D - 272 360 - -
Vra3g0814 390 Pfam RF-1 domain 265 375 IPR000352 GO:0003747|GO:0006415
Vra3g0814 390 Gene3D - 52 160 - -
Vra3g0814 390 PANTHER LD18447P 39 389 - -
Vra3g0814 390 SUPERFAMILY Release factor 82 389 IPR045853 -
Vra3g0814 390 PANTHER LD18447P 39 389 - -
Vra3g0814 390 Coils Coil 130 150 - -
Vra3g0814 390 TIGRFAM prfA: peptide chain release factor 1 59 389 IPR004373 GO:0006415|GO:0016149
Vra3g0814 390 Pfam PCRF domain 67 258 IPR005139 GO:0006415
Vra3g0814 390 Gene3D - 166 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0814 Vra-Chr3 8293617 8298980 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0814 K02835 - gmx:100800412 674.855