Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0809 ATGGCCACCATGGGGATAGTGACCAAACAGCATCTGCTAACCTACATGTATCTTCTAGTTTACATTACACTTTCATCAGGGGTTATTCTTTACAACAAGTGGGTCCTCTCTACATTATATTTTAATTTTCCATTTCCAATAACACTCACTATGATCCATATGGCTTTTTCTGGTGGTCTGGCCTTTTTGCTTGTCCGTGTTTTTAAGGTTGTGTCACCAATTAAAATGACCTTCCATATATATGCGACTTGTGTGGTCCCAATAAGTGCCTTCTTTTCCGCTAGTCTGTGGTTTGGGAATACTGCTTATCTGTTCATTTCTGTGGCCTTCATCCAGATGCTTAAAGCCCTCATGCCAGTGGCAACATTTCTCGTGGCTGTAACTTGTGGAACTGAGAAATTGAGGTGTGATGTATTCTGGAACATGGTGCTGGTCAGTGTTGGAGTTGTCATTTCCTCCTACGGAGAAATTCAATTTAATGTGCTCGGCACAGTTTATCAGGTCACAGGAATTGTTGCTGAAGCTTTGAGGCTGGTATTGACTCAAGTTCTTCTTCAGAAAAAGGGCTTGACACTAAACCCTATTACCAGCTTGTATTACATAGCACCCTGCAGCTTTGTATTTCTTTTCATTCCGTGGTACATCCTTGAGAAGCCTGAGATGGAAGATCCACATATGCAGTTTAACTTCTGGATATTTTTCTCAAATGCTGTTTGTGCTTTCGCATTGAATCTTTCCACATTCTTAGTGATTGGTAGGACTGGGGCAGTAACTATTAGGGTGGCTGGTGTTTTGAAAGACTGGTTACTTATCACTCTTTCAACTGTCTTATTTCCTGAATCAAAGATTACTGGGCTTAATATTATTGGCTACGCTATTGCTTTAATTGGTGTCGTTATGTACAACTACCTTAAGGTCAGAGATGTTCGCACGTCTCAACTTCAAAGTTCCCAAGATGGATCAACAAAGGAGCTGCAGACAATGGAAAAAGCAGTTGTTGACATGGACAACAGAGAGGAGACTTTATGGAATGATTCAGTTTCTGATACTAATTTTGATGAAGAAGCACCTTTAATGGCTTCGTCACGAACATCTCATCTTGGAATTGGACGAAAACCAGCTTAA 1125 0.4062 MATMGIVTKQHLLTYMYLLVYITLSSGVILYNKWVLSTLYFNFPFPITLTMIHMAFSGGLAFLLVRVFKVVSPIKMTFHIYATCVVPISAFFSASLWFGNTAYLFISVAFIQMLKALMPVATFLVAVTCGTEKLRCDVFWNMVLVSVGVVISSYGEIQFNVLGTVYQVTGIVAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFIPWYILEKPEMEDPHMQFNFWIFFSNAVCAFALNLSTFLVIGRTGAVTIRVAGVLKDWLLITLSTVLFPESKITGLNIIGYAIALIGVVMYNYLKVRDVRTSQLQSSQDGSTKELQTMEKAVVDMDNREETLWNDSVSDTNFDEEAPLMASSRTSHLGIGRKPA* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0809 374 PANTHER SOLUTE CARRIER FAMILY 35 3 353 - -
Vra3g0809 374 Pfam Triose-phosphate Transporter family 16 302 IPR004853 -
Vra3g0809 374 PANTHER SUGAR PHOSPHATE TRANSPORTER DOMAIN-CONTAINING PROTEIN-RELATED 3 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0809 Vra-Chr3 8266075 8272433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0809 1 368 Organic Solute Cotransporters AT3G17430 74.865 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0809 - - gmx:100779373 664.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0809 3 8266075 8272433 Vra3g0809 3 8266075 8272433 ECH