Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0802 ATGTCCAAACAAAGGCTGCAGGGTAAGGTGGCTATCGTCACCGGTGGAGCTGGCGGAATAGGAGCAGAAGCGGTGAGGATATTCGTCGAAAACGGGGCATCGGTGGTCATAGCAGACATCAAGGACGAATTAGGTCAGACGTATGCAGCTTCATTTGGCTCAGAGAAAGTGAGTTACCGCCACTGTGATGTGAGAAACGAGAAGCACGTTGAAGAAACAGTGACTTTCGCCGTAGAGAAATATGGGAGCTTAGACATCTTGTTCAGCAATGCTGGCGTCGCGGGTCCTTTGTCAAGCATTCTAACCTTCGATCTCACTGAATTTGACAACAGCATGGCCGTGCATCTTCGCGGTGCGGCAGCCTTCATCAAGCACGCGGCACGTGTCATGGTGGAAAGCAAGACACGTGGATCCATAATCTGCACGGCCAGCGTGGCTGGTTCCGTGGCCGGATGCGCGGGTCATGATTACACCGCATCCAAACACGGCCTTGTTGGGCTTGTTCGGTCGACGTGCAGCGAGCTTGGAGCTTATGGCATAAGAGTGAATTCCATTTCGCCTTATGCGGTTGCGACGCCTCTTACTTGTGAAGCCTTTGATATGACGGGTGGTGAAATTGAAGCTGCAGGTCACGCGTTAGCGAATTTGCATGGAATCACGTTGAAGGCTAGCCATATTGCAGAAGCTGCTCTGTTTCTTGCTTCTGATGAATCGGCTTATATCAGTGGACACAACTTGGTCGTCGATGGAGGTTTCCTCGTTGTTAATCGCGGTCTTCCAAGCATTAAAAATTAA 795 0.5082 MSKQRLQGKVAIVTGGAGGIGAEAVRIFVENGASVVIADIKDELGQTYAASFGSEKVSYRHCDVRNEKHVEETVTFAVEKYGSLDILFSNAGVAGPLSSILTFDLTEFDNSMAVHLRGAAAFIKHAARVMVESKTRGSIICTASVAGSVAGCAGHDYTASKHGLVGLVRSTCSELGAYGIRVNSISPYAVATPLTCEAFDMTGGEIEAAGHALANLHGITLKASHIAEAALFLASDESAYISGHNLVVDGGFLVVNRGLPSIKN* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0802 264 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 144 172 IPR020904 GO:0016491
Vra3g0802 264 Pfam Enoyl-(Acyl carrier protein) reductase 15 252 - -
Vra3g0802 264 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 1 263 - -
Vra3g0802 264 PANTHER OXIDOREDUCTASE-RELATED 1 263 - -
Vra3g0802 264 Gene3D - 1 260 - -
Vra3g0802 264 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 IPR002347 -
Vra3g0802 264 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 IPR002347 -
Vra3g0802 264 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 IPR002347 -
Vra3g0802 264 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 254 IPR036291 -
Vra3g0802 264 PRINTS Glucose/ribitol dehydrogenase family signature 10 27 IPR002347 -
Vra3g0802 264 PRINTS Glucose/ribitol dehydrogenase family signature 82 93 IPR002347 -
Vra3g0802 264 PRINTS Glucose/ribitol dehydrogenase family signature 131 147 IPR002347 -
Vra3g0802 264 PRINTS Glucose/ribitol dehydrogenase family signature 157 176 IPR002347 -
Vra3g0802 264 PRINTS Glucose/ribitol dehydrogenase family signature 178 195 IPR002347 -
Vra3g0802 264 PRINTS Glucose/ribitol dehydrogenase family signature 216 236 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0802 Vra-Chr3 8197775 8199045 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0802 6 251 Acyl Lipid Metabolism Gene Families AT3G55290 30.116 1.17e-22 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0802 - - gmx:100798299 433.721