Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0801 ATGGGAAAACCAAGGTTGCAGGGTAAGGTGGCCATTGTCACGGGCGGAGCCACCGGAATAGGAGCGGAAGCAGTGAAGATATTCGTGGAAAACGGAGCATTTGTGGTCATAGCAGACATAAAGGACAAACTGGGTCACAGTTTGGCAACTTCGTTTGGCTCAGACAAAGTGAGTTATCGGTACTGTGACGTGAGAGACGAGAATGAAGTTGCAGAAACAGTGGCATTCACAGTAGAGAAATATAACAGCTTAGACATCATGTTCAGCAACGCTGGCATCGCAGGATCTTATTCTTCCATACTAGATTTGGATCTCAAAGAATTTGACAACACCATGGCCATTAACGTTCATGGGGTAGCAGCAACCATCAAGCACGCGGCACGTGTCATGGTTGCTAGAAAAATTCGTGGATCCATAATTTGTACTGCCAGTGTGGCTGCTTCCTTTGCGGGAGGCGCGGGTCACGAATACACCGTATCAAAACACGGCGTTCTTGGGCTTGTTCGGTCGGCGTGCGGCGAGCTTGGAGCTTATGGGATAAGAGTGAATTCCATCTCGCCTTATGCACTTGCCACGCCTATGACTTGCGCCGCACTCGATGTGGGACCTGCTGAAGTTGAAGCTGCAGCATATGGTTCTGCGAATTTGGAGGGAATTACGTTGAAGGCTAATCATATTGCGGAAGCTGCTCTGTTTCTTGCTTCTGATGAATCGCTTTATATCAGTGGCCACAACTTGGTCGTCGATGGAGGTTACTCCGCCGTCAATCGCTGGCTTCCTAGGATTCAAAAGTAA 795 0.4881 MGKPRLQGKVAIVTGGATGIGAEAVKIFVENGAFVVIADIKDKLGHSLATSFGSDKVSYRYCDVRDENEVAETVAFTVEKYNSLDIMFSNAGIAGSYSSILDLDLKEFDNTMAINVHGVAATIKHAARVMVARKIRGSIICTASVAASFAGGAGHEYTVSKHGVLGLVRSACGELGAYGIRVNSISPYALATPMTCAALDVGPAEVEAAAYGSANLEGITLKANHIAEAALFLASDESLYISGHNLVVDGGYSAVNRWLPRIQK* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0801 264 PRINTS Glucose/ribitol dehydrogenase family signature 10 27 IPR002347 -
Vra3g0801 264 PRINTS Glucose/ribitol dehydrogenase family signature 82 93 IPR002347 -
Vra3g0801 264 PRINTS Glucose/ribitol dehydrogenase family signature 131 147 IPR002347 -
Vra3g0801 264 PRINTS Glucose/ribitol dehydrogenase family signature 157 176 IPR002347 -
Vra3g0801 264 PRINTS Glucose/ribitol dehydrogenase family signature 178 195 IPR002347 -
Vra3g0801 264 PRINTS Glucose/ribitol dehydrogenase family signature 216 236 IPR002347 -
Vra3g0801 264 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 144 172 IPR020904 GO:0016491
Vra3g0801 264 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 IPR002347 -
Vra3g0801 264 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 IPR002347 -
Vra3g0801 264 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 IPR002347 -
Vra3g0801 264 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 1 263 - -
Vra3g0801 264 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 255 IPR036291 -
Vra3g0801 264 PANTHER OXIDOREDUCTASE-RELATED 1 263 - -
Vra3g0801 264 Pfam Enoyl-(Acyl carrier protein) reductase 15 253 - -
Vra3g0801 264 Gene3D - 1 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0801 Vra-Chr3 8191786 8193718 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0801 6 251 Acyl Lipid Metabolism Gene Families AT1G62610 28.788 1.07e-20 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0801 - - gmx:100798299 387.497