Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0794 ATGGCCCCTGAGCTTGTTCCCACCGTCACAAAATCCACTGTCTCCTTCACCAGCCCTACCACCCTGCCACCACGTGCTTATGTCACATTCCTTGCCGGAAATGGTGACTACGTAAAAGGGGTGGTTGGTCTCGCCAAAGGCTTGAGAAAGGTTAAAACAGCTTACCCACTGGTGGTGGCGGTCCTTCCTGACGTGCCAGAAGAGCACCGAAAGATTCTTAAATCTCAGGGCTGTATAGTCCGTGAGATTGAACCCGTTTATCCACCAGAAAATCAGACACAGTTCGCTATGGCTTATTACGTCATCAACTATTCCAAGCTCCGTATATGGGAGTTTGTAGAATACAGTAAGATGATATACTTGGATGGAGACATTCAAGTATTTGAGAACATAGACCACTTATTTGACCTACCTGACGGTCACTTTTACGCTGTGATGGATTGTTTCTGCGAGAAGACATGGAGTCACACTCCTCAGTACAAGGTTGGGTATTGCCAGCAGTGTCCAGAAAAGGTGCAGTGGCCCACTGAATTGGGCCAGCCCCCTGCTCTTTATTTCAACGCCGGCATGTTCGTGTTTGAACCTAGCATGGTTACTTACCACGATTTACTGAAAAGGTTGAAAGTCACTACTCCCACATCCTTTGCAGAGCAGGACTTCTTGAACATGTACTTCAAGGACATTTATAAGCCAATTCCTCTGACCTACAACCTTGTTCTAGCCATGCTTTGGCGTCACCCAGAAAATGTTAACCTTGAGGAAGTCAAGGTTGTTCACTACTGTGCAGCGGGGTCGAAGCCTTGGAGATATACTGGAAAAGAAGAGAATATGCAGAGGGAGGACATAAAGATGCTGGTGCGTAAATGGTGGGATATCTACAACGATGCTTCTCTTGATTACAAGCCATTAGGAGCAAGTGAAGCTTCAGTAGATGGTGTTGACATTGAACCATTGGGACATCTACCAAAGATGCAGGGAGTGATCGTGCATTGCTTTTGA 999 0.4645 MAPELVPTVTKSTVSFTSPTTLPPRAYVTFLAGNGDYVKGVVGLAKGLRKVKTAYPLVVAVLPDVPEEHRKILKSQGCIVREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVFENIDHLFDLPDGHFYAVMDCFCEKTWSHTPQYKVGYCQQCPEKVQWPTELGQPPALYFNAGMFVFEPSMVTYHDLLKRLKVTTPTSFAEQDFLNMYFKDIYKPIPLTYNLVLAMLWRHPENVNLEEVKVVHYCAAGSKPWRYTGKEENMQREDIKMLVRKWWDIYNDASLDYKPLGASEASVDGVDIEPLGHLPKMQGVIVHCF* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0794 332 Pfam Glycosyl transferase family 8 29 271 IPR002495 GO:0016757
Vra3g0794 332 PANTHER GLYCOGENIN SUBFAMILY MEMBER 1 306 - -
Vra3g0794 332 CDD GT8_Glycogenin 25 296 - -
Vra3g0794 332 SUPERFAMILY Nucleotide-diphospho-sugar transferases 27 301 IPR029044 -
Vra3g0794 332 PANTHER GALACTINOL SYNTHASE 1 1 306 - -
Vra3g0794 332 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 24 300 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0794 Vra-Chr3 8131665 8133469 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0794 1 301 Glycosyltransferase AT1G56600 79.139 0.0 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0794 K18819 - gmx:100809287 610.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0794 3 8131665 8133469 Vra3g0794 3 8131665 8133469 ECH