Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0789 ATGGCCATGGCAGCTCCAACTCTGACCTCAATTCCTTCAAGAACAACCTTGAATCATCAAATCCATGGCCTTCAACTAAAATTATCAGTTTCCACTTTCAACCCTCCAATCCAAAATAGAGGAAGGAGCCTTCGAATCCGATTATTATCTTCCCCCAATCAAAACCATAATCAGTCCTCTCCCGGATTATACTCCGCAAAGAAATTCGAGCTCACCGCATCCAACGTCGACCTTGTTCTCGAAGATGTTCGCCCTTACCTCATCGCAGACGGTGGCAACGTCGACGTGGTCTCCGTCGAAGACGGCGTCGTATCTCTCCGTCTTCAAGGAGCGTGCGAGAGCTGCCCCAGCTCCACCACAACCATGACGATGGGGATCGAGCGCGTTCTTAAGGAAAAATTCGGAGATGCCGTTAAGGACATTCGCCAGGTCTACGATAACCAACCCAAGGAGACAACCGTTGAGGCTGTGAATAGTCATCTTGATGTGTTGAGACCGGCCATAAAGAATTACGGAGGCAGCGTGGAAGTGTTATCCGTTGAAGGTGAGGAGTGCCAAGTTAAGTATGTTGGACCAGACTCCATTGGATCCGGAATCAAAGCAGCCATCAAGGAGAGGTTTCCAGACATTCTCAATGTTACCTTCTCTTCCTAG 654 0.4893 MAMAAPTLTSIPSRTTLNHQIHGLQLKLSVSTFNPPIQNRGRSLRIRLLSSPNQNHNQSSPGLYSAKKFELTASNVDLVLEDVRPYLIADGGNVDVVSVEDGVVSLRLQGACESCPSSTTTMTMGIERVLKEKFGDAVKDIRQVYDNQPKETTVEAVNSHLDVLRPAIKNYGGSVEVLSVEGEECQVKYVGPDSIGSGIKAAIKERFPDILNVTFSS* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0789 217 Pfam NifU-like domain 77 136 IPR001075 GO:0005506|GO:0016226|GO:0051536
Vra3g0789 217 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 151 214 IPR034904 -
Vra3g0789 217 Gene3D - 153 215 IPR034904 -
Vra3g0789 217 PANTHER NIFU-LIKE PROTEIN 1, CHLOROPLASTIC 32 216 - -
Vra3g0789 217 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 74 146 IPR034904 -
Vra3g0789 217 PANTHER IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED 32 216 - -
Vra3g0789 217 Gene3D - 68 152 IPR034904 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0789 Vra-Chr3 8077755 8079090 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0789 K22074 - gmx:100527356 290.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0789 3 8077755 8079090 Vra3g0789 3 8077755 8079090 ECH