LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vra3g0781	ATGACGATCGGAGATGCTTTTCTATGCTTACTATTCATCGCAACTTGTTGGATTTCAGTTGCTTCTGCTGATTCCATCTATGGCTGTGGTGGTTTTGTCGAGGCGAGCTCATCGTTGGTAAAATCGAGAAAACAAACTGATACCAAGTTGGACTATTCCGATGTCACGGTTGAGCTTCAAACTGTGGATGGACTGGTAAAGGATAGAACACAATGCGCTCCGAATGGATACTATTTTATTCCAGTATATGACAAGGGTTCCTTTGTAATTAAAATTAATGGACCTCCAGGATGGACATGGGATCCAGAAAAGGTTCCTGTGGTGGTTGACAATAATGGTTGCAATGGTAATGAAGATATAAATTTTCGTTTCACTGGGTTCACTATATCTGGTAGAGTTGTGGGAGCTGTAGGGGGAGAAAGCTGTTCAATAAAAAATGGAGGCCCATCAAATGTAAAAGTTGAACTATTGTCCCTTTCTGGGGATCTGGTCTCTTCCGTCTTAACTTCATCATCAGGGAGTTACTTGTTTACAAACATCATTCCAGGAAAATATACACTACGCGCTTCAAATCCCGATATGGAAGTTGAAGTTAAAGGTTCCACACAGATTGAATTGGGCTTTGGAAATGGGGTAGTTGATGATGTTTTCTTTGTCCCTGGATATAGTATCAGTGGATTTGTTGTTGCTCAGGGAAATCCTATTGTTGGAGTCCATATTTTCTTATATTCAGATGATGTTTCTGAGGTAGAATGTTTGCAAGGCACTGCTACTGGCCCACGACAAGAAAGAGCTCTCTGTCATGCTGCATCAGATGCTGATGGAAAGTTCACATTCAATTCAATACCTTGTGGGAGTTATGAACTTGTTCCATACTATAAGGGTGAGAATACCGTATTTGATGTTTCGCCACCCAGTGTCTCAGTTAATGTCAAACATCAGCATGTAACAGTGCCTCAAAAGTTTCAGGTAACTGGATTTTCTGTTGGAGGCCGTGTGGTTGATGGAAATGGCATGGGAGTGGAGGGTGTCAAAATCATAGTTGATGGTCATGAAAGGTCTATTACTGATAATCAAGGATATTACAAACTCGATCAGGTTACATCCAAGCACTATACCATAGAAGCCCAAAAGGAGCATTACAAATTCAAGAATTTGGAGAATTATATGGTATTGCCAAATATGGCTTCAATAGAAGACATCAATGCCATTTCATACAGTCTCTGTGGTTTGGTTAGGATGGCTGATGGTGGTCTGAAAGCAAAGGTAGCTTTGACTCATGGACCTGATAATATGAAACCACAAAAGAAGCAAACAGATGAAAATGGAAACTTCTGTTTTGAGGTTCTTCCCGGGGAATATCGTCTGTCAGCCATTGCTGCAACTCCTGAGAATGCTGCTGGGCTCATGTTTACTCCATCTTATATCGATGTTGTGGTCAAAAGTCCCCTGTTGAATATTGAATTTTCACAAGCTCTGGTCAATATTCATGGTGCTGTATCCTGCAAGGAGAAATGTGGTCCATTTGTATATGTTAGCCTGGTGAGGCAAGTTGAGAAACATAATGGAGAGAGAAAAGCAATTAGCTTGACCACTGAGAGTAGTGAATTTCAGTTTTCAAATGTTATTCCTGGAAAATACAGGCTTGAGGTCAAAAACAGTTCCCCTGAATCGGTCACATTGAAAGATAATTGGTGCTGGGAACGGAACTTCATAGATGTAAATGTTGGTGCCGAAGACGTAGAAGGAATCCTTTTTGTTCAAAAAGGCTACTGGGTCAATGTTATCTCGACTCACAATGTTGATGGCTACCTGACTCAACCAGATGGGTCAATTTTGAATTTGAAAATTCAGAAAGGTTCCCAGCATATATGTGTTGAACATCCTGGTGTACATGAATTTAGTTTTGTTGACTCGTGTATCTTCTTTGGGAGTTCATCGGTGAAAATTAATACAGCTACTCAATCGCCTATTCACCTTACTGGAGAAAAGTATCTTCTCAAAGGACAGATAAATGTGCAGTCTGGCTCACTTGATACATTGCCTGAGAACATAGTTGTTGATATTAAACATGACGGAACTGGTGTTATTGATTATACCACAGCCACACTGAAGTCCCATGCGAAAGATCAAACAGAAACTGCTATATTTGAGTATTCTGTTTGGGCCAATCTAGGAGAAAAGCTTACCTTTGTTCCTTGGGACTCTAGGAATGATGGGCAGAAGAAACTTTTATTTTATCCTAGAGAACATGAAGTATCAGTGACAGATGATAATTGTCAAGCTTATATTCCTACATTTTCTTGTGAAGTGGGTGCATATATTGAAGGATCAGTTTCACCTCCTCTTTCTGGCGTCCATATCAGAGTTTTTGCTGCTGGAGACAGCAGCATTACTGCACTTAAAAATGGCGAACTAGTTCTTGAAACAACCACTGGTACTGATGGTTCCTATGTGGCAGGACCTCTGCACAATGATATCGGTTACAATGTCGAGGCTTCAAAGCCTGGATATCATTTAAAACAAGTTGCGCCTCATTCCTTTACTTGTCAGAAGCTTAGTCAAATTTTAGTACACATACATCACAAAGATGATGCTGAAGAGCCCATTCCTTCTGTTCTGTTATCTTTGAGTGGTGACAATGGTTATAGAAACAACTCGGTATCAGGGACTGGAGGGACATTCCAGTTTGATAATTTGTTTCCTGGAATGTTCTATTTACGTCCTGTTTTGAAGGAGTATGCTTTCTCACCTCCAGCACAGGCAATAGAGCTTGGAGCAGGGGAGTCCAGAGAAGTTATTTTCCAGGCCACGCGTGTAGCCTACAGTGCTACTGGTGTTGTCACTTTGTTGTCCGGACAACCCAAAGGAGAAGTTTCAGTTGAAGCCCGGTCAGAGTCAAAAGGCTATTTTGAGGAAACAGTGACAGATTCCAATGGAAATTATCGTCTGAGAGGACTACAGCCTGATACTGTCTATGTTGTCAAAGTGGCTAGAAGGGATGCTGTAGGCAGTTCTAATATAGAACGTGCATCTCCAGATTCAATTGCTATAAAGGTTGGAACCGAAGATATCAAGGGTTTGGATTTTATAGTTTTCGAGGAGCCGGAAATGACAATTATAAGTTGCCACGTTGAAGGAAACGGAACAGATGAACTACGTAAACATCTGATGGTAGAAATTAGGTCAGCCAGTGACCTTAACAAGATAGAGTCAGTCTTCCCCCTTCCAATTTCTAACTTCTTCCAAGTGAAGGGCTTATCAAAGGGAAGACACCTTCTACAGCTTCAATCTGGTCTCCCACAAAGCTCGCTTAAGTTTGAATCTGATACCATTGAGGTCGACTTGGAAAAAAATGTTCAAATCCATGTGGGCCCGCTGGTATACAGGATCGAAGATCAACTGAAACAGGAATTGACTCCTGCACCAGTATTCCCTCTTATAGTTGGATTCCTAGTTATTTCACTGTTTATTAGCATGCCAAGATTGAAGGATTTGTATCAAGCCACAGTAGACATACCCACTCCAGGACTCAATGCGGCTTCAAGAAAAGACGTGAAGAAGCCAATGTTGCGAAAGAAGACTTATTAA	3591	0.4107	MTIGDAFLCLLFIATCWISVASADSIYGCGGFVEASSSLVKSRKQTDTKLDYSDVTVELQTVDGLVKDRTQCAPNGYYFIPVYDKGSFVIKINGPPGWTWDPEKVPVVVDNNGCNGNEDINFRFTGFTISGRVVGAVGGESCSIKNGGPSNVKVELLSLSGDLVSSVLTSSSGSYLFTNIIPGKYTLRASNPDMEVEVKGSTQIELGFGNGVVDDVFFVPGYSISGFVVAQGNPIVGVHIFLYSDDVSEVECLQGTATGPRQERALCHAASDADGKFTFNSIPCGSYELVPYYKGENTVFDVSPPSVSVNVKHQHVTVPQKFQVTGFSVGGRVVDGNGMGVEGVKIIVDGHERSITDNQGYYKLDQVTSKHYTIEAQKEHYKFKNLENYMVLPNMASIEDINAISYSLCGLVRMADGGLKAKVALTHGPDNMKPQKKQTDENGNFCFEVLPGEYRLSAIAATPENAAGLMFTPSYIDVVVKSPLLNIEFSQALVNIHGAVSCKEKCGPFVYVSLVRQVEKHNGERKAISLTTESSEFQFSNVIPGKYRLEVKNSSPESVTLKDNWCWERNFIDVNVGAEDVEGILFVQKGYWVNVISTHNVDGYLTQPDGSILNLKIQKGSQHICVEHPGVHEFSFVDSCIFFGSSSVKINTATQSPIHLTGEKYLLKGQINVQSGSLDTLPENIVVDIKHDGTGVIDYTTATLKSHAKDQTETAIFEYSVWANLGEKLTFVPWDSRNDGQKKLLFYPREHEVSVTDDNCQAYIPTFSCEVGAYIEGSVSPPLSGVHIRVFAAGDSSITALKNGELVLETTTGTDGSYVAGPLHNDIGYNVEASKPGYHLKQVAPHSFTCQKLSQILVHIHHKDDAEEPIPSVLLSLSGDNGYRNNSVSGTGGTFQFDNLFPGMFYLRPVLKEYAFSPPAQAIELGAGESREVIFQATRVAYSATGVVTLLSGQPKGEVSVEARSESKGYFEETVTDSNGNYRLRGLQPDTVYVVKVARRDAVGSSNIERASPDSIAIKVGTEDIKGLDFIVFEEPEMTIISCHVEGNGTDELRKHLMVEIRSASDLNKIESVFPLPISNFFQVKGLSKGRHLLQLQSGLPQSSLKFESDTIEVDLEKNVQIHVGPLVYRIEDQLKQELTPAPVFPLIVGFLVISLFISMPRLKDLYQATVDIPTPGLNAASRKDVKKPMLRKKTY*	1197

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vra3g0781	1196	Gene3D	Immunoglobulins	143	216	IPR013783	-
	Vra3g0781	1196	SUPERFAMILY	Carboxypeptidase regulatory domain-like	327	394	IPR008969	-
	Vra3g0781	1196	PANTHER	CARBOXYPEPTIDASE REGULATORY REGION-CONTAINING	7	1177	-	-
	Vra3g0781	1196	PANTHER	NODAL MODULATOR 1-RELATED	7	1177	-	-
	Vra3g0781	1196	SUPERFAMILY	Starch-binding domain-like	218	297	IPR013784	GO:0030246
	Vra3g0781	1196	Gene3D	-	329	405	-	-
	Vra3g0781	1196	SUPERFAMILY	Starch-binding domain-like	942	998	IPR013784	GO:0030246
	Vra3g0781	1196	Pfam	Carboxypeptidase regulatory-like domain	945	997	-	-
	Vra3g0781	1196	SUPERFAMILY	Cna protein B-type domain	146	196	-	-
	Vra3g0781	1196	SUPERFAMILY	Cna protein B-type domain	863	922	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vra3g0781	-		-	gmx:100794049	2185.61

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vra3g0781	3	8000197	8015070	Vra3g0781	3	8000197	8015070	ECH