Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0777 ATGGAGGATTTGGGTGGTACCCGATTTGATGGCCTCAGCAATGCTGTGAGGAGGAAGAGGAGTCAGACTTCTCGCAGGCCGCGGCCTGATTCGCAGCCTGTTTCTGACGGTCATGAACTGTCCCCCTTGTCGTCAACACCGTCAGAGGATGCTGGCAAGGTCTCCAGTGATGAGAATGTTGGCTACGATGCAAATTCCAAGAGAAAGGAGTTCAATCTTAATCATTGTGTCTCTCAAACTTCATCGGTTGCTGGAGCTGAAGACGATAAATCTCATAAAAAGAGTAAAAAGGATGGTGGGTTCCAAGCATTTTATAATAACGAACCTGGACGGAGTGGTTTGCATAATAAACGCTGTAGTGAAGGTGTTCTTGCGCCGGCAAATTGGAGAGGTTCAAGCAAAGCAAAGGATAGCTTGGATTTAGATTCCAGAAATGCAGATTTGTATGCTGCAAGGAATCCTGAGAGTGTGAATTTGGCGCAGTTTGGTGGCTCTCAAGATGGACTGGGGAATGAGAGCCGAGTTAAAAAGGTTAAACTCAAGGTTGGCGGGGTGACACGTACTATTCAAGCCAATTCAGCAACCAATGGTGCTTCAGGAAGCGGATCAACAATGAAGAGCTCTCGCTCATCGGATGCTTCCCGACCGCGCCAAAAACAACAGAGTAATTCAGATGAAAATAACTCTCCTTCTGACAAGAGGAGTGGTCTACAAGGCGTTCCGTGGAAGGATTTCTCAAGGGGTGGTTTTGGTCTTGGAAAGGAGGAATCATTGATGGGAAAGATTTCTGCAAAAAACGCATCTAGTAAGTTGGGCGACAAGTCTGAACCAGTTCGAAAGAGTAAGCGAGTACCAAAGAGACGTGTACTTGATGGGGAATTTGGTGATGATGATGATGAGGATGATGAGATTCGGTACTTGGAAAAGCTGAAAACATCAAAAGTTTCTGCAGTTTATAGAGATGAAGAAGAATTAAGCAAAAAACATCGAAAGCTCTCTAATATGGAAAATGCTGCCTCGACAAGGTCAGGCAAAGATGGTAAGAAAAAGTCTAGATCTGATAGAGTGTATGAGGACACCGATTACGAGGATGAAGAGGAGTCAGGCTCTGAAGGTGAGCTTGAGGATAAGAAAAAGAAAAAACAGAGGAAGGAGTCTGTTGATGTACTGATGGACAGTAAGAGGGAAATTACCCTCACGACTCGTCAACGAGCCCTACAATCAAGCAAAGACGCCTCAGCATCGAGTGCTAGTTTAATTGAGTTTCCCAATGGATTACCACCTGCCCCTCCTAGAAAACAAAAGGAGAAGCTTTCAGAGGTAGACCAGCAATTGAAGAAAGCCGAAGCTGCACAGAGGCGTAGAATGCAAGTTGAGAAGGCTGCCAGGGAATCTGAGGCTGAGGCTATCAGAAAAATACTCGGTCAAGACTCTAGTAGAAAAAAGCGAGAAGAGAAAATAAAGAAGCGCCAGGAAGAATTGGCACAGGAAAAGGCAGCAAATGCAAGAATGCATGCGTCAAATACCATCAGATACACAATCGGCCCGACTGGAACAGTTGTGACTTTTCCTGAGGAAATGGGGTTGCCTAGCTTATTTAACTCCAAACCTGTCAGTTATCCTCCACCTCGCGAGAAGTGTGCTGGTCCATATTGTTCAAATCCTTATAAGTATCGGGATTCAAAATCAAAACTTCCTCTTTGCAGTCTTCAATGCTACAAGGCTGTCCAGGAGAAGGTAGTGGCTGAAACTACCTGTTGA 1761 0.4514 MEDLGGTRFDGLSNAVRRKRSQTSRRPRPDSQPVSDGHELSPLSSTPSEDAGKVSSDENVGYDANSKRKEFNLNHCVSQTSSVAGAEDDKSHKKSKKDGGFQAFYNNEPGRSGLHNKRCSEGVLAPANWRGSSKAKDSLDLDSRNADLYAARNPESVNLAQFGGSQDGLGNESRVKKVKLKVGGVTRTIQANSATNGASGSGSTMKSSRSSDASRPRQKQQSNSDENNSPSDKRSGLQGVPWKDFSRGGFGLGKEESLMGKISAKNASSKLGDKSEPVRKSKRVPKRRVLDGEFGDDDDEDDEIRYLEKLKTSKVSAVYRDEEELSKKHRKLSNMENAASTRSGKDGKKKSRSDRVYEDTDYEDEEESGSEGELEDKKKKKQRKESVDVLMDSKREITLTTRQRALQSSKDASASSASLIEFPNGLPPAPPRKQKEKLSEVDQQLKKAEAAQRRRMQVEKAARESEAEAIRKILGQDSSRKKREEKIKKRQEELAQEKAANARMHASNTIRYTIGPTGTVVTFPEEMGLPSLFNSKPVSYPPPREKCAGPYCSNPYKYRDSKSKLPLCSLQCYKAVQEKVVAETTC* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0777 586 MobiDBLite consensus disorder prediction 372 399 - -
Vra3g0777 586 Coils Coil 480 500 - -
Vra3g0777 586 MobiDBLite consensus disorder prediction 317 502 - -
Vra3g0777 586 Pfam PAPA-1-like conserved region 443 527 IPR006880 GO:0031011
Vra3g0777 586 MobiDBLite consensus disorder prediction 342 358 - -
Vra3g0777 586 MobiDBLite consensus disorder prediction 317 335 - -
Vra3g0777 586 Coils Coil 441 468 - -
Vra3g0777 586 MobiDBLite consensus disorder prediction 1 119 - -
Vra3g0777 586 MobiDBLite consensus disorder prediction 400 420 - -
Vra3g0777 586 PANTHER HIT ZINC FINGER AND PAPA-1-LIKE DOMAIN-CONTAINING PROTEIN 1 586 - -
Vra3g0777 586 MobiDBLite consensus disorder prediction 433 499 - -
Vra3g0777 586 MobiDBLite consensus disorder prediction 151 303 - -
Vra3g0777 586 Pfam HIT zinc finger 543 574 IPR007529 -
Vra3g0777 586 MobiDBLite consensus disorder prediction 71 85 - -
Vra3g0777 586 PANTHER INO80 COMPLEX SUBUNIT B 1 586 IPR029523 GO:0006338|GO:0031011
Vra3g0777 586 MobiDBLite consensus disorder prediction 272 293 - -
Vra3g0777 586 MobiDBLite consensus disorder prediction 37 53 - -
Vra3g0777 586 SMART PAPA_1_2 442 527 IPR006880 GO:0031011
Vra3g0777 586 MobiDBLite consensus disorder prediction 186 235 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0777 - - gmx:100814323 927.932
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0777 3 7974282 7978403 Vra3g0777 3 7974282 7978403 ECH