Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0772 ATGGAGAGACAGAGAAGTTTCTCCTTGAAACCCACTAGGCTTTTGGTTTTCTCATTCACTATGTTTTCCTCGATTCTCTTCCTCTCCACCTTCACCACTTGGCTCACCAATTTCACTCCTTCAGTTCACCAACAGATTCATCTTCATTTCAACACTTCTACTTCTACTTCTACTACTAATACTTCTTCATCTCATTCTTCTTCTTCTTCTTCTTCTGTCGGTGACGGTGACAGTGTAACACTCCCACCTTTATTTGTTCATTCCCTGACCGAAAACTTCACACTCAGTGGTGAGAAAATTTCAACTTTGATCGATAACCGTCTTTCCAGGAACCAGGAAAGCTTCTCCGGATCCAAATCTGAACCTGTACGACACCATGTTGGTGCTTCGAATGTCAATTTCACGGCAATGCGAGAGTATGGAACTTCGCCTGAGAGGGTTCCCGGCAACGAGCAGAAGAAGATAGTAACTGGAGGTTTAGATGGGAATACTCAAGTTCCTTTTTTGAAGAAGGTTGAGCAGAAAGGAGTTGAAGGGTGTGATTTAACAAAAGGGTATTGGGTTTTTGATGAAAGCTATGCCCTTTATTCCAAAGATTCGTGTCCTTTCATAGATGAAGGTTTTGATTGTGTGGGGAATGGAAGATTGGATAGAGACTACTCTAAGTGGAGATGGCAGCCCAAAGACTGTGACATTCCGAGGTTCAATGCAACTAAAATGCTGGAGTTGATTAGAGGGAAAAGGCTTGTTTTTGTGGGTGATTCGATTAATAGGAACCAATGGGAATCAATGTTGTGCATGTTATTGGGTGGTATTAAAGATCCATCGAGAGTGTACGAGACCCATGGAAGGAAAATTACGAAAGAGAAGGGAAATTATAGTTTCAGGTTTCTGGATTATCAATGTACGGTTGAATACTATGTCAGTCATTTCTTAGTTCATGAAAGCAAGGCACGAATTGGGCAGAAACGAAGACCAACCTTGCGAATTGATGCCATTGATCATGGTTCATCAAGATGGAAGGGAGCTGATGTTTTGGTTTTCAACACTGCGCATTGGTGGTCACATTACAAAACAAAAGCTGGGATTTATTACTACCAAGAAGGAAGTGTAGTTCATCCCCAGCTAAATGTTTCCACAGCTTTCAGAAAAGCTTTAAAGACTTGGTCTTCATGGGTGGACAGACACATCAATCATCGAAAAACCAGAGTTTTCTTTCGAAGTTCAGCACCATCACATTTCAGTGGTGGTGATTGGAATTCTGGAGGGCATTGTACAGAAGCCACTCTTCCTCTAAACGAAACCTTATTAAGCACTAGTTATCCTGAGAAGAACATAATCGTAGAGCAGATAATAGAGGAAATGAAAACTCCTGTGACATTGTTGAATGTAACTAGTTTGTCAGCATATAGGATCGATGGTCACCCATCAGTTTATGGGAGAAAAACACGGTCTTCTAGGATTCAAGATTGTAGCCATTGGTGTCTTCCAGGAGTTCCAGATACATGGAATGAATTGTTATATTTTCATCTACAGAGTAGATGA 1545 0.411 MERQRSFSLKPTRLLVFSFTMFSSILFLSTFTTWLTNFTPSVHQQIHLHFNTSTSTSTTNTSSSHSSSSSSSVGDGDSVTLPPLFVHSLTENFTLSGEKISTLIDNRLSRNQESFSGSKSEPVRHHVGASNVNFTAMREYGTSPERVPGNEQKKIVTGGLDGNTQVPFLKKVEQKGVEGCDLTKGYWVFDESYALYSKDSCPFIDEGFDCVGNGRLDRDYSKWRWQPKDCDIPRFNATKMLELIRGKRLVFVGDSINRNQWESMLCMLLGGIKDPSRVYETHGRKITKEKGNYSFRFLDYQCTVEYYVSHFLVHESKARIGQKRRPTLRIDAIDHGSSRWKGADVLVFNTAHWWSHYKTKAGIYYYQEGSVVHPQLNVSTAFRKALKTWSSWVDRHINHRKTRVFFRSSAPSHFSGGDWNSGGHCTEATLPLNETLLSTSYPEKNIIVEQIIEEMKTPVTLLNVTSLSAYRIDGHPSVYGRKTRSSRIQDCSHWCLPGVPDTWNELLYFHLQSR* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0772 514 MobiDBLite consensus disorder prediction 53 76 - -
Vra3g0772 514 PANTHER - 127 513 IPR029965 -
Vra3g0772 514 Pfam PMR5 N terminal Domain 179 231 IPR025846 -
Vra3g0772 514 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 127 513 IPR029962 GO:0016413
Vra3g0772 514 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 232 508 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0772 Vra-Chr3 7945597 7947952 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0772 - - pvu:PHAVU_001G213200g 947.192
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0772 3 7945597 7947952 Vra3g0772 3 7945597 7947952 ECH