Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0743 ATGGAAGACGAGAATTTCAGTTTTGGCCGCTCTACTGCCTCCAGAAGCTACCAATCCAGGCTCAAGTCACACTTCGAGCTTTTCATCGATTTTGATGAGGTCAATGGGGATGAGGATTTTAGGACGGCTTATCCATGCCCTTTTTGCGCAGATGATTTTGATCTTCTTGAGCTATGTTGCCATATTGACTTGGACCATCCAGCAGAAGCCAAGTCTGCGATTTGTCCCGTGTGTACCGTGTGGATTGGGTCAAATGTCGTTGATCATATAGCAGCACAACATGGAAACTTGTTTAAGAGTCAGCTGAAATCAAAATGGTACAAAGATGAATCCTACCCAGATCTTTCCTTTTCAAGAAAGGGTAAACCGGATTTTTCTGCTGGGTTATCTCCCGGGATGTCTACCTCCAACACATCAAGTGATGCATGGCTGTCATTTTTGTATGGTGCATCTGCTGTTGATGAATGTGAAAATGTGCTGCCAGATTCTTCAAGTGAAATAAGCGTTGAAGAAGTGCAATCAAATGATAAAGTGTTAGAAAGGGATGTTCAGCCATATTTATCTGACAAAGACCAAATAGAGAAAGCACAGCGCAGTAAATTTGTACAGGGACTTTTGGTGTCTACTATCCTTGATTCTGACTTCTGA 648 0.4244 MEDENFSFGRSTASRSYQSRLKSHFELFIDFDEVNGDEDFRTAYPCPFCADDFDLLELCCHIDLDHPAEAKSAICPVCTVWIGSNVVDHIAAQHGNLFKSQLKSKWYKDESYPDLSFSRKGKPDFSAGLSPGMSTSNTSSDAWLSFLYGASAVDECENVLPDSSSEISVEEVQSNDKVLERDVQPYLSDKDQIEKAQRSKFVQGLLVSTILDSDF* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0743 215 Pfam Drought induced 19 protein (Di19), zinc-binding 43 95 IPR008598 -
Vra3g0743 215 PANTHER PROTEIN DEHYDRATION-INDUCED 19 1 215 IPR033347 -
Vra3g0743 215 Pfam Stress-induced protein Di19, C-terminal 128 210 IPR027935 -
Vra3g0743 215 PANTHER DROUGHT-INDUCED PROTEIN 1 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0743 Vra-Chr3 7723084 7726636 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0743 - - gmx:100527153 350.903