Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0742 ATGGCTATGGGAAACTACACTGAACGCCTAAGAACAACTTGGTCATCCGAGATGGATCGTTATTTCATCGATCTTATGTTAGAGCAAGTTAGTCAAGGCCAAGTTGAGGATCATTTGTTCAGCAAAAAGGCGTGGAAGCATATGTCTTCAAAGTTCAATGCTAAGTTCAATTTTCAGTTCGAAAAAGATGTTCTTAAGAACCGCCACAAAACGTTAAGGAATCTGTACAGGAGTACGAAGAACCTTCTTGGCCAACCGGGGTTTAGCTGGGACGAAAAGCGAAATATGGTCATCGTTGATGATCAGGTAGATGTGAATGCGCTAACATGTAGAGTAAATAAAAGTATACCCAATTTCAAAGACTTGTGCACTATTTATGGACATGTGGTGGAAACGAAAGGTGATGCAGCATCCGAAGAGTTATCTAATTCAGGCAAAAAGGGAGCATTTGTTCCTTATGTATCAAAGGATATCTGTGAGGATGCTGATAAACTTCTTCGTGATGTCAAGGCTGATGAAGACTGTGGAATCTTTACCTTGGATAAAGTAACTGATGATTGTGAACAAAGAGTGTCGAAGGAAACAACAACCTCTTCTGGTACCCGGACCCGGACTTATTGGCAGCCACCCATGGATCGTTACTTCATTAACTTGATGCTTGCTCATGTGCAAAAAGGGAATCATGGGGTTTTCAGCAAACAAGCATGGATGGAGATAATTTCATCATTCAATGAAAAATTTGGTTTTGAGTATAGTTTGGAGATTCTTAAGAATAGGTACAAAACTCTTAGAAGGCAATATAATTTAATTAAAAGCCTCCTTCAGTTGGATGGCTTTGCCTGGGATGAAACGCGCCAGATGGTTATTGCGGATGATTGTGTCTGGCAAGATTATATTAAGGTTCATCCGGATGCTCGACAATATATGACTCGACCTTTGCCATACTATAAAGATTTGCGTGTCATATATGATCCAAGTTTTGATGAAAAAGAATATCCTTTGCCTCCAGATAGGCATCAAAATGCAATTGATGTTAAGATTGAGTGCCCTTCAACGTCTAACACTGTTCAGCCTCCAATTACACCCAATTCTAATGAGGACCAATTTAGTGGTGTCATTGAGTTACATCATATAGGTCAGAAACAGAAGCACCAATTAGAGAAATTTTCTAATTCTACAAGTCCTAAAAGATTAAGGAATGATGAACAAGGCATGGCTGCTGCACTCCATGAGATGGCAGCTGTAGTTTCAACGGTGTCTGCAAAAAAGAATGATACCTCAATATCAATAGAGAACGTCATAGAAGCAGTGCAAGCATTGCCTGATATGGATGATGACCTGGTTTTGGATGCTTGTGATTTCTTGGAGGATGAAAGAAAAGCTAAAACATTTCTTGCATTGGATGCCAAGCTTAGAAAGAAATGGTTGATTAGGAAACTTCGCACATAG 1449 0.3961 MAMGNYTERLRTTWSSEMDRYFIDLMLEQVSQGQVEDHLFSKKAWKHMSSKFNAKFNFQFEKDVLKNRHKTLRNLYRSTKNLLGQPGFSWDEKRNMVIVDDQVDVNALTCRVNKSIPNFKDLCTIYGHVVETKGDAASEELSNSGKKGAFVPYVSKDICEDADKLLRDVKADEDCGIFTLDKVTDDCEQRVSKETTTSSGTRTRTYWQPPMDRYFINLMLAHVQKGNHGVFSKQAWMEIISSFNEKFGFEYSLEILKNRYKTLRRQYNLIKSLLQLDGFAWDETRQMVIADDCVWQDYIKVHPDARQYMTRPLPYYKDLRVIYDPSFDEKEYPLPPDRHQNAIDVKIECPSTSNTVQPPITPNSNEDQFSGVIELHHIGQKQKHQLEKFSNSTSPKRLRNDEQGMAAALHEMAAVVSTVSAKKNDTSISIENVIEAVQALPDMDDDLVLDACDFLEDERKAKTFLALDAKLRKKWLIRKLRT* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0742 482 Coils Coil 253 273 - -
Vra3g0742 482 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 7 130 - -
Vra3g0742 482 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 179 339 - -
Vra3g0742 482 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 373 481 - -
Vra3g0742 482 Pfam Myb/SANT-like DNA-binding domain 13 103 IPR024752 -
Vra3g0742 482 Pfam Myb/SANT-like DNA-binding domain 206 298 IPR024752 -
Vra3g0742 482 PANTHER EXPRESSED PROTEIN 179 339 - -
Vra3g0742 482 PANTHER EXPRESSED PROTEIN 7 130 - -
Vra3g0742 482 PANTHER EXPRESSED PROTEIN 373 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0742 Vra-Chr3 7718739 7722155 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0742 - - gmx:100787716 716.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0742 3 7718739 7722155 Vra3g0742 3 7718739 7722155 ECH