Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0727 ATGGAACTTTTTGCAAAACTCTTCTCGGCCTTGGTTCTGTGTGTAGTTGTAATGGCACACCAGGTAGTTGCATTGAATGAAAATCTAATTATTGGCAAGGAAACACTGCTAACAGGAAAGCTTCTAATCAATAAGGTATGCACAAAGTCTCCGACCAGAGATCTCTGCATTGAGGTTCTCTCATCCGATCCATTAGTTAGCCCTACTGCTAACCTCAAAGACTTAGCAATTATTTCCCTTAGGTTTGCTGCCACAAACGCTTCCGGCATCCTCAGTGATGCCAAAATTCTCATTGATGACGTCAACCTAGACCCTGATGTCCAACAAGGTTTGGCTGATTGCAAGGAGAACATTTTGGATGCAGAGAGCCAGCTAGAGGACACCATTGCCTCCTTGATGATCGGTTTGAAATCTGAGGCACAACGTTGGCTCAAAGCTGCCTTGGCTGCCATAGACACTTGCGATGCCTCCATCCCCGGAGATGATGACATTCTCTCTGTTGATAGTACTGTCTTCCGCAAGCTCTGCAACATTTCCATCACCGTTACTAAGCTCCTCGTTAGGTCAAATAAGTTATAA 579 0.4491 MELFAKLFSALVLCVVVMAHQVVALNENLIIGKETLLTGKLLINKVCTKSPTRDLCIEVLSSDPLVSPTANLKDLAIISLRFAATNASGILSDAKILIDDVNLDPDVQQGLADCKENILDAESQLEDTIASLMIGLKSEAQRWLKAALAAIDTCDASIPGDDDILSVDSTVFRKLCNISITVTKLLVRSNKL* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0727 192 Pfam Plant invertase/pectin methylesterase inhibitor 42 180 IPR006501 GO:0004857
Vra3g0727 192 SMART PMEI_2 38 182 IPR006501 GO:0004857
Vra3g0727 192 Gene3D Invertase/pectin methylesterase inhibitor family protein 40 187 IPR035513 -
Vra3g0727 192 TIGRFAM PME_inhib: pectinesterase inhibitor domain 27 186 IPR006501 GO:0004857
Vra3g0727 192 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 1 187 - -
Vra3g0727 192 PANTHER PECTINESTERASE 1 187 - -
Vra3g0727 192 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 42 186 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0727 Vra-Chr3 7588714 7589557 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0727 - - pvu:PHAVU_001G208600g 257.299