Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0726 ATGGATCACTTTGCAAAATCTCTGTGGGTGTTGGCTCTATGCGTAGCTGTAATGACACAGCAGGCAGCTGCATTGGACAAATCGAAAGGAAAACCTACTGGCGAAAAGGAAACACCAACAGGAAAGACTCTGATAAAAAAGGTATGCTCATCGTCCCCAACCAAAGACCTCTGCGTTCAGGTCCTCTCTTCTGATGCACTAAGCACCACCGCAAACCTCAAAGAATTGGCAATCATTTCCCTTAGGGTTGCTGCCAGAAACGCTTCCGGCATCCTCGCCGACACCAAAGTTCTCATCGATGATGACGAACTTGACCCTGATATCCAACAAGGTTTGGCTGATTGCAAGGAGAACATCTTGGACGCAGAAAGCCAGCTGGAGGACACCATTGCTGCCTTGATGGTCAATTCTGAAGGTGACGCTCAGCTTTGGCTCAAGGCTGCCTTGGCTGCCATCGACACCTGCGATGCCTCCATCCCCGGAGACGACGACATTCTCTCTGTTGAGAGCGCCGTCTTCCGCAAGCTCTGCAACATCGCCAACTCCGTCATCAAGCAACTCCCTAATCCAACCAAATCTTAA 582 0.5034 MDHFAKSLWVLALCVAVMTQQAAALDKSKGKPTGEKETPTGKTLIKKVCSSSPTKDLCVQVLSSDALSTTANLKELAIISLRVAARNASGILADTKVLIDDDELDPDIQQGLADCKENILDAESQLEDTIAALMVNSEGDAQLWLKAALAAIDTCDASIPGDDDILSVESAVFRKLCNIANSVIKQLPNPTKS* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0726 193 SMART PMEI_2 40 183 IPR006501 GO:0004857
Vra3g0726 193 Gene3D Invertase/pectin methylesterase inhibitor family protein 40 187 IPR035513 -
Vra3g0726 193 PANTHER PECTINESTERASE 7 186 - -
Vra3g0726 193 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 43 187 IPR035513 -
Vra3g0726 193 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 7 186 - -
Vra3g0726 193 Coils Coil 112 132 - -
Vra3g0726 193 Pfam Plant invertase/pectin methylesterase inhibitor 44 180 IPR006501 GO:0004857
Vra3g0726 193 TIGRFAM PME_inhib: pectinesterase inhibitor domain 32 187 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0726 Vra-Chr3 7584388 7585451 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0726 - - pvu:PHAVU_001G208600g 238.424