Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0716 ATGAAGCTTAAAGAGATAGAGAGAGGTAACCGGAAAAATCAGAAGTCAAAGAAGAAGAAGCAAAACCTACAACGGCAGAAGAGAGGCCCTCGTTTGCCTTCTTCTTTGCAAAAGCAGATTGACCGTTTAAACCCTACAACTACCTTAGACAGTGCCAATTCCGATGACGACAACGACCTTTACGAATACGAGGAAGAGAGGGCCGAGGAAGAGTCTAGGAAAAATAAGCGTTACGACCCTGTTTCCGTGAACGATGACCTCTCTGAAGAAATTGAGGATGAGAATGTGCAATCTGATGATGAAAGTGGGGACAGTGATTACATTGGGACTAAGAGGGATGAAAATGTTCAAAGTGATGATTCTGGAGAAGATGATGGGAGGCATGCAAGGATGCTACAAGCAATTACTGGTATGCCTGGTGAGGCTTTTGAAGAGAATACGAAGAAAAAGAAGACGATGAATGACTTTGTTATCCCTAAGCTATATCCAGGGTCTGAATATAATCCTAGTAGTGATGTTGGGGAAGTTAATGCACGCATTAGCATAGAGGACCTACTGAATCCTCTTAGTGAAAAGCCGACTTATGGAAAACTTCGGAAGAGACAGCTTCAAATTATGAAGCACGGTAGAATTGTTCATGCGCCACTTTCAAAGGCGGTTCAAGCAAAGGTAGAGAGGACAGCAGCCTATGAAATATCAAAGAAAGATGTCAGCAAGTGGCAGCATATTATTCAGAGAAATAGAGAGGCTCCAACTGTTTTCTTTGATGAAGATGTGAATCTAGGATTTTCAACTGTAGGAGCAATAGCTTCTGAATTTGAACCCAGAACGGAATTTGAGAAGAAAATAGCTGCACTAGTTTATGACAATGAAGTAACGGATGCCCATAAAAATGATGGTTCTAAGCTTCTTGAAATGAACAAGGTGTCTATTGAAGATGAGAAGGATAGGCAAAATCGGATTGCTAAAATGCGGAGCCTTCTTTTTCGTCATGAAATGAAGGCAAAGCATATTAAAAAGATCAAGTCCAGAACATTTCATCGTTTGTTGAAGAAAGATAGGTTAAAAGCAGAAGCTTCTCAGATACAAATGGACCCCCAAGCTGCTAAAGAACATGCCATGAAACGAGAGCGTGAAAGGGCCGAGGAACGCATGACTCTAAAACACAAAAACCAGAATCGGTGGGCTAAGCGTATTATACAACGTGGCTTAAATAGCCAAGATGAAGGAACACGTGCGGCTATAGCTGAACAACATCAAAGACATGCTGAATTGACTAGAAAAATGCACTCTATGAAGGATAGCAGCAGTAGCAGTGAAGATACCAGTGATGAGGATGAAGATGAAAACTCTGCTGGTTCTGATCAGGAGAGGGCTTACAAGCTTTTGGGAAAAGCTAGAGATAAAACCATGAAAGTGTTGGAGGAAGAGGATGAAGTTCCCAAATCAGGATTGCTTTCTTTGCCTTTTATGAGGCGTGGATTGGAGAAAAGAAGAGAGGAAGCTGTCGAAGAAGCTAACCTTGCTTTCCAAGAATATGAAGATTCCTTGAAGAAACTAGAGAATTCTGATGGCTTAGGAGATCCAAAAGCTGCTTCTACCAGTGGCCGAAGAGTATTTGGACCAGCCAAAGCTCAAATATCTGATACCAGTGTTAAGGTAAAATCATATAATAGCTATGGTGGCAGTGATAGTGAGGATGACTTGGGAATCGGCAAAAGTGACAACATGGAGAATATGGGAAGTCACCTTTTGCATAACAAGGATTCGGTTGTAATTCAAGAAGACACTGATACTCACAAGGAATCTTTGTTGAAGACCATTGATGATATTATTGAAAATCCTGGGCCAAAAACTACATGCGAAGTTTCCATATTTGTGTCAGATCAGTGGAAAAAGGCAAAGAACAAAAATGAAAACACAACTATTAAGAAGTCTCCAAACCTTACAGGGCCAGTTAGTCAAAATAAAAAAGATGCTGAAAAGGAAATTGGAGAGGATAGTGATACCGATAGTGAGGGACAGATGGTGGATGGAATTCTGTCTTCTGTTTCTAAAGTGCCTTATGAACTTCCTTCTCAAGAGGAGCTCATTCGGCAAGCGTTTGCAGGGGATGATGTAGAAGGGGATTTTGAAAAGAACAAGCAGGAGATCCTCGAGGAAGAAAATCCTGAGCCAGAAAAGCCTCTGTTACTTCCTGGCTGGGGCCAGTGGACACATATACAGGAAAAGAAAGGTTTACCATCTTGGATGCTGAAAAAACATGAAGATGCCCAGAAAAAAAGGGCAGAGGCACTCAAAAAGAGGAAGGATGCTCAGCTTAAAAACGTGATTATATCTGAAAAGATAGATAAGAAGGCTGAAAAACTGCATACTAAATCACTGCCGTTCCCGTTTACATCCAAAGAGGTGTTTGAACAGAGCATGCGTGTGCCAATCGGACCTGAATTTAATCCAGCAACTGCAATTGGTCCTCTTAACCAACCCGAAGTGGTGAAGAAACCAGGTGTTATAATAAAGCCGGTGGAGTTTGAAGACGTGAATCCTCATGAAAAATCAGAACAACGAAGTGGTGATAAGCGAAAGTTTAAGAAAACTAGTGGCAAACCCGTGAAAAAGGCGAAAGTGGGAGGGAAAAAGTAA 2643 0.4143 MKLKEIERGNRKNQKSKKKKQNLQRQKRGPRLPSSLQKQIDRLNPTTTLDSANSDDDNDLYEYEEERAEEESRKNKRYDPVSVNDDLSEEIEDENVQSDDESGDSDYIGTKRDENVQSDDSGEDDGRHARMLQAITGMPGEAFEENTKKKKTMNDFVIPKLYPGSEYNPSSDVGEVNARISIEDLLNPLSEKPTYGKLRKRQLQIMKHGRIVHAPLSKAVQAKVERTAAYEISKKDVSKWQHIIQRNREAPTVFFDEDVNLGFSTVGAIASEFEPRTEFEKKIAALVYDNEVTDAHKNDGSKLLEMNKVSIEDEKDRQNRIAKMRSLLFRHEMKAKHIKKIKSRTFHRLLKKDRLKAEASQIQMDPQAAKEHAMKRERERAEERMTLKHKNQNRWAKRIIQRGLNSQDEGTRAAIAEQHQRHAELTRKMHSMKDSSSSSEDTSDEDEDENSAGSDQERAYKLLGKARDKTMKVLEEEDEVPKSGLLSLPFMRRGLEKRREEAVEEANLAFQEYEDSLKKLENSDGLGDPKAASTSGRRVFGPAKAQISDTSVKVKSYNSYGGSDSEDDLGIGKSDNMENMGSHLLHNKDSVVIQEDTDTHKESLLKTIDDIIENPGPKTTCEVSIFVSDQWKKAKNKNENTTIKKSPNLTGPVSQNKKDAEKEIGEDSDTDSEGQMVDGILSSVSKVPYELPSQEELIRQAFAGDDVEGDFEKNKQEILEEENPEPEKPLLLPGWGQWTHIQEKKGLPSWMLKKHEDAQKKRAEALKKRKDAQLKNVIISEKIDKKAEKLHTKSLPFPFTSKEVFEQSMRVPIGPEFNPATAIGPLNQPEVVKKPGVIIKPVEFEDVNPHEKSEQRSGDKRKFKKTSGKPVKKAKVGGKK* 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0716 880 MobiDBLite consensus disorder prediction 1 126 - -
Vra3g0716 880 Pfam Utp14 protein 130 844 - -
Vra3g0716 880 MobiDBLite consensus disorder prediction 520 572 - -
Vra3g0716 880 MobiDBLite consensus disorder prediction 641 655 - -
Vra3g0716 880 MobiDBLite consensus disorder prediction 369 390 - -
Vra3g0716 880 MobiDBLite consensus disorder prediction 862 880 - -
Vra3g0716 880 MobiDBLite consensus disorder prediction 549 563 - -
Vra3g0716 880 MobiDBLite consensus disorder prediction 636 676 - -
Vra3g0716 880 MobiDBLite consensus disorder prediction 398 413 - -
Vra3g0716 880 MobiDBLite consensus disorder prediction 104 126 - -
Vra3g0716 880 Coils Coil 755 775 - -
Vra3g0716 880 MobiDBLite consensus disorder prediction 844 861 - -
Vra3g0716 880 Coils Coil 492 523 - -
Vra3g0716 880 MobiDBLite consensus disorder prediction 85 101 - -
Vra3g0716 880 PANTHER U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 14 15 858 IPR006709 GO:0006364|GO:0032040
Vra3g0716 880 Coils Coil 6 26 - -
Vra3g0716 880 MobiDBLite consensus disorder prediction 357 467 - -
Vra3g0716 880 MobiDBLite consensus disorder prediction 414 439 - -
Vra3g0716 880 MobiDBLite consensus disorder prediction 27 54 - -
Vra3g0716 880 MobiDBLite consensus disorder prediction 67 84 - -
Vra3g0716 880 MobiDBLite consensus disorder prediction 843 880 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0716 Vra-Chr3 7522620 7531222 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0716 K14567 - gmx:100811431 1317.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0716 3 7522620 7531222 Vra3g0716 3 7522620 7531222 ECH