Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0715 ATGGATTTAGATTTTGAATATCACGAAGAATACAGAAGAAACTCAAGAGGAGTGCAACTTTTCACCTGTAAATGGTTACCTTCATCTTCTCCCATGGGTCTGGTTTTCCTTTGCCATGGTTATGGCATGGAGTGCAGTGGCTTCATGAGAGAATGTGGTGTAAGACTAGCGTGTGCTAAATATGCCGTGTACGGCATCGATTATGAAGGGCATGGACGTTCTGAAGGTGCTCGTTGTTACATAAAGAAGTTCGATAACGTCGTTAATGATTGTTATGACTTTTTCAAGTCTGTCGGCGAGCTCCAAGAGTATAAGGGGAAGGCTAGGTTCTTGTATGGAGAGTCCATGGGAGGGGCAGTGAGCCTACTTTTGCACAGAAAGGACCCTTCATTCTGGGACGGTGCAGTTCTTGTTGCGCCCATGTGTAAGATATCAGAGAAAGTGAAGCCACACCCGGTGGTGATCAACATATTGACTAAAGTGGAAGATATAATCCCAAAGTGGAAGATAGTTCCCACTAAGGATGTCATCAATGCAGCCTTCAAAGACCCTGCTAAAAGACAGAGGATAAGGAAAAACAAGTTAATATACCAGGACAAGCCCAGGCTAAAAACAGCACTGGAAATGTTAAGAACCAGCATGAGCCTAGAAGACAGCTTATATAAGGTGACCCTGCCTTTTTTTGTATTGCATGGAGAAGCAGATACAGTGACCGACCCAGAAATAAGCAGGGAATTATATGAGAGGGCAAGTAGCAAAGATAAGACCATAAAGTTGTACCCAGGAATGTGGCATGGCTTAACATCAGGGGAGACAGATGAGAACATAGAAAAAGTTTTTGAAGACATTATAATTTGGCTAGATAAGCATACGGGCAATCCAACTCATGCTTCCACAGAACAAATTGAGACTTATAAGTATGACATTGAGAGATTGACTACAGTTACATCGTCAGCAAAGTTTGTAAAGCAAGAAAACGGGCGAAGAAGCTATCTCTGTGGCCTGAAAGGAAACCGCTTGTTATACCACTCAGCAATTTAG 1041 0.4265 MDLDFEYHEEYRRNSRGVQLFTCKWLPSSSPMGLVFLCHGYGMECSGFMRECGVRLACAKYAVYGIDYEGHGRSEGARCYIKKFDNVVNDCYDFFKSVGELQEYKGKARFLYGESMGGAVSLLLHRKDPSFWDGAVLVAPMCKISEKVKPHPVVINILTKVEDIIPKWKIVPTKDVINAAFKDPAKRQRIRKNKLIYQDKPRLKTALEMLRTSMSLEDSLYKVTLPFFVLHGEADTVTDPEISRELYERASSKDKTIKLYPGMWHGLTSGETDENIEKVFEDIIIWLDKHTGNPTHASTEQIETYKYDIERLTTVTSSAKFVKQENGRRSYLCGLKGNRLLYHSAI* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0715 346 SUPERFAMILY alpha/beta-Hydrolases 8 292 IPR029058 -
Vra3g0715 346 Gene3D alpha/beta hydrolase 6 298 IPR029058 -
Vra3g0715 346 Pfam Serine aminopeptidase, S33 30 270 IPR022742 -
Vra3g0715 346 PANTHER PHOSPHOLIPASE-RELATED 8 304 - -
Vra3g0715 346 PRINTS Alpha/beta hydrolase fold signature 60 75 IPR000073 -
Vra3g0715 346 PRINTS Alpha/beta hydrolase fold signature 111 124 IPR000073 -
Vra3g0715 346 PRINTS Alpha/beta hydrolase fold signature 227 241 IPR000073 -
Vra3g0715 346 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 8 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0715 Vra-Chr3 7507211 7511056 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0715 48 346 Acyl Lipid Metabolism Gene Families AT2G47630 64.821 5.04e-148 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0715 K18368 - mnt:21389635 528.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0715 3 7507211 7511056 Vra3g0715 3 7507211 7511056 ECH