Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0714 ATGGCTTCGGGATTGGTTTTCCGAGGACACGAGGCCCAACCTGTCAACGACGCCTATTCCGCCAAGCCACAGAAGCCATGGTTCTCCCTCCGCTACTTCTTCCGCGAGCAGCGACTCCATTTCCTCTTCTTCGGCATTCTCCTCGCCTCCGTCTTCTTCCTCCTCTTCCCCTCCGTCTCTTCTCCTCCCGCCCGAGCCCACGACCCACTCCCCGCTTCTTTCTCCGCACGCCACGACTTAACGCACTGGATCACTACCAACACCCGAGCCTATGACGTGGCGGTGCATTCCTCGGGGAGGATCCCTCTAGGGATCAAACGAAAAGCGCGCCGGGTGGTGGTGACTGGCGGGGCCGGGTTTGTCGGGTCCCACTTAGTGGATCGGTTGATTAGCCGAGGAGACAGCGTGATCGTGGTCGACAATTTCTTCACAGGAAGGAAAGAAAACGTGATGCACCATTTTGGGAATCCGAATTTCGAACTTATCCGACACGACGTCGTTGAGCCTCTCCTCTTGGAAGTAGACCAGATCTACCATCTCGCTTGCCCTGCCTCACCTGTCCATTACAAGTTCAATCCCGTCAAGACTATTAAGACCAACGTGGTGGGCACGTTGAACATGCTGGGGCTTGCTAAAAGGGTTGGCGCGAGGTTCCTTTTAACCAGTACCAGCGAGGTTTACGGAGATCCTCTGCAACACCCTCAGAAGGAGACTTATTGGGGCAACGTCAATCCCATTGGTGTTCGAAGCTGCTACGACGAGGGAAAGCGTACGGCTGAAACATTAACCATGGATTACCACAGAGGAGCTGGAGTCGAGGTAAGAATAGCTAGGATTTTCAACACCTACGGGCCCAGAATGTGCTTAGACGATGGTCGCGTTGTTAGTAACTTCGTCGCTCAGGCACTAAGAAAGGAGGCTTTGACCGTTTATGGGGATGGGAAGCAAACAAGAAGTTTCCAATACGTTTCTGATCTGGTGGAGGGGCTGATGCGCCTTATGGAAGGAGAACATGTAGGACCTTTCAATCTTGGAAATCCTGGTGAATTTACCATGCTTGAACTTGCCAAGGTGGTTCAAGAAACAATAGATCCAGAGGCTAAGATAGACTACAGGCCGAACACAGAGGATGACCCACACATGAGAAAGCCTGATATCAGTAGGGCCAAAGAGCTACTGGGCTGGGAACCCAAGGTGGACCTACGCAAGGGACTCCCTCTAATGGTTTCTGACTTCCGACAACGCATTTTTGGGGACCAAAAGGAAGGAGCAACCTCTACCTAA 1284 0.5265 MASGLVFRGHEAQPVNDAYSAKPQKPWFSLRYFFREQRLHFLFFGILLASVFFLLFPSVSSPPARAHDPLPASFSARHDLTHWITTNTRAYDVAVHSSGRIPLGIKRKARRVVVTGGAGFVGSHLVDRLISRGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQALRKEALTVYGDGKQTRSFQYVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAKVVQETIDPEAKIDYRPNTEDDPHMRKPDISRAKELLGWEPKVDLRKGLPLMVSDFRQRIFGDQKEGATST* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0714 427 CDD UGD_SDR_e 110 413 - -
Vra3g0714 427 Gene3D - 232 417 - -
Vra3g0714 427 Gene3D - 106 231 - -
Vra3g0714 427 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 1 423 IPR044516 GO:0042732|GO:0048040|GO:0070403
Vra3g0714 427 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 110 417 IPR036291 -
Vra3g0714 427 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE 4 1 423 - -
Vra3g0714 427 Pfam GDP-mannose 4,6 dehydratase 114 406 IPR016040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0714 Vra-Chr3 7502209 7507101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0714 25 405 Miscellaneous Gene Families AT4G00110 25.532 8.80e-23 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0714 K08678 - gmx:100782935 742.265