Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0706 ATGAGTCGTCATCCTGAGGTTAAGTGGGCTCAGAGAGTTGACAAGGTCTATATCACTGTGCAATTGGCTGATTCAAAAAATGCTAAAGTGGATCTTACTCCTGAAGGCGTTTTTACCTTCTCTGGCAGTGCTGGCACTGAAGACCATCAGTATGAGCTAAAACTGGAGCTCTTTGATAAGGTTAATGTAGAGGAGAGCAAAATTAATGTAGGAGTGCGAAGCATATTCTCTGTAGTGCAGAAGGCAGAAAATGGATGGTGGAAAAGGTTACTGCGTGGAGAAGGCAAGACTCCACATTATGTGAAAGTAGATTGGGATAAATGGGTGGACGAGGATGAAGAAGATGGCAGTGGTGAACCGGACTTGGGAGGAATGGATTTCTCGAAATTTGGAGGAATGGGTGCGGATGGAATGGGAGGGATGGATTTCTCTAAATTTGGTGGTGATGCAATGGATGACATTGATGAGAGTGATGATGAAGAGCAAGAAGTGTCGAAGCCTGTTGAAGCCGAGGCTGGCGAGGCATCAACGGAGACAAAAGAGGCTGCTCCAAGCACATGA 561 0.4581 MSRHPEVKWAQRVDKVYITVQLADSKNAKVDLTPEGVFTFSGSAGTEDHQYELKLELFDKVNVEESKINVGVRSIFSVVQKAENGWWKRLLRGEGKTPHYVKVDWDKWVDEDEEDGSGEPDLGGMDFSKFGGMGADGMGGMDFSKFGGDAMDDIDESDDEEQEVSKPVEAEAGEASTETKEAAPST* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0706 186 Gene3D - 2 122 IPR008978 -
Vra3g0706 186 ProSiteProfiles CS domain profile. 2 91 IPR007052 -
Vra3g0706 186 PANTHER TELOMERASE-BINDING PROTEIN P23 HSP90 CO-CHAPERONE 1 157 IPR045250 GO:0051879
Vra3g0706 186 PANTHER BNAC05G01500D PROTEIN 1 157 - -
Vra3g0706 186 CDD p23_hB-ind1_like 5 113 - -
Vra3g0706 186 MobiDBLite consensus disorder prediction 140 186 - -
Vra3g0706 186 SUPERFAMILY HSP20-like chaperones 1 141 IPR008978 -
Vra3g0706 186 Pfam CS domain 6 81 IPR007052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0706 Vra-Chr3 7432142 7434901 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0706 - - pvu:PHAVU_001G206400g 317.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0706 3 7432142 7434901 Vra3g0706 3 7432142 7434901 ECH