Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0705 ATGGAGAGCAGTGCGGCCATGGATGTTGAGGAGCAACCTTCGCCCAACTCCACCAACGTTAAACGCTTCGGCCTTAAAAACTCTATTCAAACCAACTTCGGCGATGACTATGTTTTCCAAATTGTCCCAAAGGATGATTGGAGTGCAATGGCGGTTTCACTGTCAACGAGCGCAGTGAAACTATATTCACCCATGGCGGGTCAATATTTCGGAGAGTGCAAGGGTCACACCGCAACCATCAATCAGATTTTATTTTCGGGTCCTTCACACCACCAAGTTTTGTGTTCGTGCTCTTCTGATGGCACTATTAGAGCTTGGGACACACGCACATTTCAGCAGGTTTCTTGCATCAATGCGGGTTCTTCGCAGGAGGTTTTCAGCTTCTGTCTTGGAGGAACTAGTGGGAATTTAGTTGCCGCCGGGTGTAAATCGCAGATACTGTTCTGGGATTGGAGAAATATGAAGCAAATTGCATGCCTGGAAGACTCTCATGTAGATGATGTCACTCAGGTTCATTTTGTCCCCAACGAACAAGGAAAGCTTATTTCTGCTTCAGTAGATGGGTTGATCTGCACATTTGATACCACTGGAGATATCAATGATGATGATCATCTAGAATCGGTGATTAATATGGGGACTTCAATTGCAAAGGTGGGGATTTTTGGAGAGAGTTACCAGAAGCTTTGGTGTTTAACACATATTGAAACCCTAGGTATCTGGAACTGGAAAGATGGTAGAAATGAAGGAAACTTCTCAGATGCACGTACTTTAGCTTCTGAAAGTTGGAATTTGGACCATGTTGATTATTTCATCGATTGCCACTACAACAGAGAATCTGAAAAACTATGGGTGATTGGTGGCACTAATGCTGGTACTATGGGCTACTTTCCTGTAAATTACAAAGGAGTGGCAACAATTGGAGGTGCAGAAGCAATTCTTGAAGGTGGGCACACAGGTGTTATTAGGAGTGTTTTACCAATGTCAAAAATTCATTCTAACAGTCCTAGCCAAGGCATTTTTGGATGGACCGGTGGAGAAGATGGTCGGCTATGTTGTTGGCTATCTGATGATTCCTCTGAATCAAATCGATCTTGGATTTCAAGCACATTGATTATGAGACCAGAAAAAACTCGCAAGAAAAATCGTCATCAACCTTACTAG 1161 0.4332 MESSAAMDVEEQPSPNSTNVKRFGLKNSIQTNFGDDYVFQIVPKDDWSAMAVSLSTSAVKLYSPMAGQYFGECKGHTATINQILFSGPSHHQVLCSCSSDGTIRAWDTRTFQQVSCINAGSSQEVFSFCLGGTSGNLVAAGCKSQILFWDWRNMKQIACLEDSHVDDVTQVHFVPNEQGKLISASVDGLICTFDTTGDINDDDHLESVINMGTSIAKVGIFGESYQKLWCLTHIETLGIWNWKDGRNEGNFSDARTLASESWNLDHVDYFIDCHYNRESEKLWVIGGTNAGTMGYFPVNYKGVATIGGAEAILEGGHTGVIRSVLPMSKIHSNSPSQGIFGWTGGEDGRLCCWLSDDSSESNRSWISSTLIMRPEKTRKKNRHQPY* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0705 386 ProSiteProfiles Trp-Asp (WD) repeats profile. 73 116 IPR001680 GO:0005515
Vra3g0705 386 SMART WD40_4 153 194 IPR001680 GO:0005515
Vra3g0705 386 SMART WD40_4 110 150 IPR001680 GO:0005515
Vra3g0705 386 SMART WD40_4 66 107 IPR001680 GO:0005515
Vra3g0705 386 MobiDBLite consensus disorder prediction 1 21 - -
Vra3g0705 386 Pfam WD domain, G-beta repeat 68 107 IPR001680 GO:0005515
Vra3g0705 386 SUPERFAMILY WD40 repeat-like 38 353 IPR036322 GO:0005515
Vra3g0705 386 ProSitePatterns Trp-Asp (WD) repeats signature. 94 108 IPR019775 -
Vra3g0705 386 Gene3D - 8 217 IPR015943 GO:0005515
Vra3g0705 386 PANTHER UNCHARACTERIZED 21 386 IPR039328 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0705 K24758 - gmx:100787377 729.169
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0705 3 7426877 7431153 Vra3g0705 3 7426877 7431153 ECH