Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0703 ATGGATTTGATGTGTCATTGTTCCAGTTTTCTTCTTTCGCCGGAGAACCCCAACGCCGCGTGTTCTCTTTCTCTGAACTACGCTCTCGTTATTCTCAATCAGAGTCTTCCGAGATTTGCTCCTCTGCTCTGGGACCACGCTCATGTGCGAGTGTGCGCCGATGGAGGTGCCAATAGGGTGTATGATGAAATGCCTCTTTTCTTCCCGCATCAACAACCTTCCCATGTTCGCTCCAGGTACAAGCCTGATGCAATTAAAGGAGACATGGATTCAATACGGAAAGAAGTACTTGATTTCTATGCAAAACTGGGAACTGAGATAATTGATGAGTCGCATGATCAGGACACCACAGATTTACACAAATGTGTCACATACATACGTGACCTCACCCCAAAGATTGATGGATCAGAGCAATGCATTCTAGTTGCTGGAGCACTTGGTGGGAGATTCGACCATGAGATTGGAAATATTAATGTTCTGTGTCGATTTCCCAACACACGGATTATCCTTCTATCTGATGATTGCCTCATTCATCTTCTTCCAAAGAATCGGTATCATAAAATCTTTATTCAATCTTCTGTTGAGGGTCCCCATTGTGGACTCATTCCAATTGGGGTGCCGTCTGGAAGCTCTACAACCACAGGACTCAAATGGGACCTCAAGGAGACGGCAATGAGATTTGGAGGTTTAATAAGCACGTCGAATATTGTAAAAGGAGAAATAGTTACAGTACAGTCTGATTCAGATCTTCTTTGGACTATTTCTATCAAGAAGCTTTAG 780 0.4372 MDLMCHCSSFLLSPENPNAACSLSLNYALVILNQSLPRFAPLLWDHAHVRVCADGGANRVYDEMPLFFPHQQPSHVRSRYKPDAIKGDMDSIRKEVLDFYAKLGTEIIDESHDQDTTDLHKCVTYIRDLTPKIDGSEQCILVAGALGGRFDHEIGNINVLCRFPNTRIILLSDDCLIHLLPKNRYHKIFIQSSVEGPHCGLIPIGVPSGSSTTTGLKWDLKETAMRFGGLISTSNIVKGEIVTVQSDSDLLWTISIKKL* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0703 259 PANTHER THIAMINE PYROPHOSPHOKINASE 1 3 257 - -
Vra3g0703 259 PIRSF TPK1 4 259 IPR016966 GO:0004788|GO:0005524|GO:0009229
Vra3g0703 259 Gene3D Thiamin pyrophosphokinase, catalytic domain 25 168 IPR036759 GO:0004788|GO:0005524|GO:0009229
Vra3g0703 259 Gene3D - 169 258 - -
Vra3g0703 259 PANTHER THIAMIN PYROPHOSPHOKINASE 3 257 - -
Vra3g0703 259 SUPERFAMILY Thiamin pyrophosphokinase, catalytic domain 26 176 IPR036759 GO:0004788|GO:0005524|GO:0009229
Vra3g0703 259 SMART TPK_B1_binding_a_2_a 186 250 IPR007373 GO:0009229|GO:0030975
Vra3g0703 259 Pfam Thiamin pyrophosphokinase, catalytic domain 42 167 IPR007371 GO:0004788|GO:0005524|GO:0009229
Vra3g0703 259 SUPERFAMILY Thiamin pyrophosphokinase, substrate-binding domain 178 258 IPR036371 GO:0009229
Vra3g0703 259 Pfam Thiamin pyrophosphokinase, vitamin B1 binding domain 186 251 IPR007373 GO:0009229|GO:0030975
Vra3g0703 259 TIGRFAM thi_PPkinase: thiamine pyrophosphokinase 29 254 IPR006282 GO:0004788|GO:0006772
Vra3g0703 259 CDD TPK 28 254 IPR007371 GO:0004788|GO:0005524|GO:0009229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0703 K00949 - gmx:100795320 490.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0703 3 7411791 7415888 Vra3g0703 3 7411791 7415888 ECH