Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0701 ATGTCCTTTCCTTTAAAACTATCACGCACCGAGAAATGTTTCACCAACACCAACCCTCTGTTCTCTTCCTTTCTTCCTCACTCTTCTTCCATGGCTTCCAATAACCTCAAACATCGACTCACACCGCATCCAGACACCGCCGCCAATGACAAAGGGATGATCGGAGACAAACGCCAGAAACGAAAGGTGATGGCCAAACGCGGCCTAAAGTCACTCGCCATAGCTGTTACCCTCCCTTTCTCTCTCACCGTCTTATCAGCATGCATAGGCTCCTCCATCGCCGGTGATCATTCTCTCTCTACCAGAAGGCCCTTCTGGTTCCCACCCTCCTGGGCCCTGCACTTCACCTGCCCCTCCATAAGCTTCTTGATGGGTCTGGCCGCCTGGATGGTCTGGGCAGAAGGAGGTTTCCACCGAAACCCCATGGCTCTGTTGTTTTACTTTACTCAACTCCTTTTCGCGGTGCTCTGGGATCCCCTTGTGTTTGCTGCTGGGGCCACACGGCTCAGCCTGATGCTCTGTTTAGTGTTATTCGTGAGCCAGTACGGGTGCATGCGTGTGTTTCGCTCCGTCAATCCCATTGCTGCTGATTTGATAAAGCCTTGTCTGGCATGGGTTGCTTTTCTATCTATTGTTGGACGACGATTTGTGCTCTTTTATGTTGTTCGAATGTGA 675 0.5126 MSFPLKLSRTEKCFTNTNPLFSSFLPHSSSMASNNLKHRLTPHPDTAANDKGMIGDKRQKRKVMAKRGLKSLAIAVTLPFSLTVLSACIGSSIAGDHSLSTRRPFWFPPSWALHFTCPSISFLMGLAAWMVWAEGGFHRNPMALLFYFTQLLFAVLWDPLVFAAGATRLSLMLCLVLFVSQYGCMRVFRSVNPIAADLIKPCLAWVAFLSIVGRRFVLFYVVRM* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0701 224 Gene3D TspO/MBR protein 67 218 IPR038330 -
Vra3g0701 224 PANTHER PERIPHERAL-TYPE BENZODIAZEPINE RECEPTOR 54 218 IPR004307 GO:0016021
Vra3g0701 224 PANTHER TSPO/MBR FAMILY PROTEIN 54 218 - -
Vra3g0701 224 CDD TSPO_MBR 72 211 IPR004307 GO:0016021
Vra3g0701 224 Pfam TspO/MBR family 76 212 IPR004307 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0701 Vra-Chr3 7405864 7406831 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0701 K05770 - gmx:100785785 261.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0701 3 7405864 7406831 Vra3g0701 3 7405864 7406831 ECH