Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0700 ATGGGTGGCAGAAGGTTGAAAAACAGAGAAACCATGGGCGTTGAATCGGTGGCGCCGTCGCCACCACCTCCGAGATCGGAAGGAAAAACCGCTTTGCTCCAAAACCCCAAGATACCCTTCGCACTGGCTCTTCTCTTCGCTGACACCCTCCTCGTCACTCTCATAATCTCATTTGTCCCTTATACGAAGATAGATTGGGACGCTTACATGTCACAGGTTAGCGGGTTTCTCGAAGGGGAGAGAGACTTCCGCAACCTCAAAGGCGACACTGGTCCTCTCGTATACCCTGCTGGCTTTCTCTACATTTACTCTGCATTTCAGTATCTTACCCAAGGACAAGTTTACCCTGCTCAGATTCTGTTTGGTGTATTGTATATCGTTAACTTAGCAATCGTTCTCGCCGTCTATGTCAAAACAGATGTGGTTCCGTGGTGGGCCCTTTGCTTACTTTCTCTGTCCAAAAGAGTTCATTCCATCTTCGTGCTTCGTCTATTTAATGACTGTGTGGCCATGACACTTCTTCATGCTGCATTACTCTTACTTGTGCAACGAAGGTGGAATCTTGGGTTGATTGTGTTTAGTGGAGCTGTTTCGGTAAAGATGAATGTGCTTCTTTATGCTCCACCTTTACTGCTCCTCATGCTGAAGGCTATGGATTTCATTGGCGTGTTATTGGCATTAGCTTGGGCAGCAGTTGTTCAGATATTACTGGGGCTTCCTTTCCTGGTTTCATATCCAGTTGCGTACATATCGAGCGCCTTCAATCTCGGCCGTGTCTTCATCCATTTCTGGTCTGTTAACTTCAAATTCATCCCTGAGCCAGTATTTGTGTCCAAGGGATTTGCGGTCTTTTTGTTGGCTGCTCACCTCATATTACTTGCTTCATTTGCGCATTATAGTTGGTGCAAACATGAAGGGGGACTTTGCAACTTTCTGCATTCCAGATATGTGTTTATGAGAATGAGGTTTGCGGTTTTCTTCTCTTCCTCTTTTTCTAAGAAGGTTGGCAAGAGCGGTTCATTATCCCTCCAGATCCTTAATAAAGAACATATTGTGACAACTATGTTTGTTGGGAACTTCATTGGCATTGTATGTGCTCGGTCATTGCATTATCAGTTCTATTCTTGGTACTTCTATAGTTTACCATACTTGTTGTGGAGAACGCATTACCCAACTTTGTTGCGTTTGATTTTGTTCGTGGGAGTGGAGCTGTGCTGGAATATCTATCCTTCGAATAGTCTTTCTTCAGCATCACTTCTCTGTCTTCACTTAATTATTCTCTGGGGTTTGTGGTCTGCTCCACCTGAGTATCCTTATGAACAGTCCAAGCCATCCTCTGGGAAAAACAAATAG 1353 0.4457 MGGRRLKNRETMGVESVAPSPPPPRSEGKTALLQNPKIPFALALLFADTLLVTLIISFVPYTKIDWDAYMSQVSGFLEGERDFRNLKGDTGPLVYPAGFLYIYSAFQYLTQGQVYPAQILFGVLYIVNLAIVLAVYVKTDVVPWWALCLLSLSKRVHSIFVLRLFNDCVAMTLLHAALLLLVQRRWNLGLIVFSGAVSVKMNVLLYAPPLLLLMLKAMDFIGVLLALAWAAVVQILLGLPFLVSYPVAYISSAFNLGRVFIHFWSVNFKFIPEPVFVSKGFAVFLLAAHLILLASFAHYSWCKHEGGLCNFLHSRYVFMRMRFAVFFSSSFSKKVGKSGSLSLQILNKEHIVTTMFVGNFIGIVCARSLHYQFYSWYFYSLPYLLWRTHYPTLLRLILFVGVELCWNIYPSNSLSSASLLCLHLIILWGLWSAPPEYPYEQSKPSSGKNK* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0700 450 Pfam ALG3 protein 43 416 IPR007873 GO:0000030
Vra3g0700 450 PANTHER DOL-P-MAN:MAN(5)GLCNAC(2)-PP-DOL ALPHA-1,3-MANNOSYLTRANSFERASE 33 448 - -
Vra3g0700 450 PANTHER NOT56 - RELATED 33 448 IPR007873 GO:0000030
Vra3g0700 450 MobiDBLite consensus disorder prediction 1 29 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0700 25 450 Miscellaneous Gene Families AT2G47760 69.087 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0700 K03845 - gmx:100785253 741.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0700 3 7400021 7405121 Vra3g0700 3 7400021 7405121 ECH