Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0699 ATGGACGGACATGACTCTGAAGACCCAAAGCAAAGCACTGCAGATATGACAGCTTTTGTGCAAAATCTTCTTCAACAGATGCAAATAAGGTTCCAGACAATGTCTGACTCCATCATTACAAAGATTGATGAGATGGGAAACCGTATAAATGAGTTGGAAGAAAGCATCAATGATCTAAGAGCAGAGATGGGAGTGGAGAGCACTCCATCACCTGTGGCCCCTGTTGCCCGTGCTAAGCCAAAGGAAGAAGAGTCGAACAAAGAAGAAGGTTCTGCTTGA 279 0.4444 MDGHDSEDPKQSTADMTAFVQNLLQQMQIRFQTMSDSIITKIDEMGNRINELEESINDLRAEMGVESTPSPVAPVARAKPKEEESNKEEGSA* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0699 92 Pfam Heat shock factor binding protein 1 15 62 IPR009643 GO:0003714
Vra3g0699 92 MobiDBLite consensus disorder prediction 64 92 - -
Vra3g0699 92 PANTHER HEAT SHOCK FACTOR BINDING PROTEIN 1 1 84 IPR009643 GO:0003714
Vra3g0699 92 Gene3D - 9 56 - -
Vra3g0699 92 PANTHER HEAT SHOCK FACTOR-BINDING PROTEIN 1-LIKE 1 84 - -
Vra3g0699 92 Coils Coil 42 62 - -
Vra3g0699 92 MobiDBLite consensus disorder prediction 77 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0699 Vra-Chr3 7397178 7399053 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0699 K19765 - gmx:100781854 165.236