Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0693 ATGGCAGCAAAGCCTGCAGAAGAACCTCCTCATGGAGAAACTCTCAAGTACCAGACGTGGGTTCTCAAAGTATTGATCCACTGCGATGGCTGCAGAAAGAGAGTCAAGAAAATTCTTCAAGGAATTGATGGGGTTTACAAAACAGAGGTGGATTCTCTGCAGCACAAGGTTACGGTCACTGGTAACGTGGACGCCGAGACTCTCATCAAGAGGCTTTCAAGATCAGGGAGGCTAGTGGAGCTTTGGCCAGAGAAACCAGCTGAGAAGAAAGATAATAAAAAGTCCGGAAAATCCAATAAGGGTGGTGATATCAACAAGGAGAAGGAAATCCAAAAGAATGGTGAACCAGGTGCTGATGGTGGTTCAAACGAGGGTTCTAAAGATGGTGGTTCAAATGAGGGTTCTAAAGATGGTGAAGATTCTGACAAAGAAGAACACAATGATGAATGTGAGGAGGGAGGTGATGGTGATGGTGGTGGTGGTGAAGGTGGCAAAAAGAAGAAAAAGAAAAAGAAGAAGAAAAACAAAGGGGAAAACGGTGGTTCTGCATCTGTTCCTCCTAAGAATGGAGAAATTAGTAAAGTTGATGCTTCAGTGCCTTCAATGGCTGCTAAGGATCTTGTTAACCCTCCAATTCAGCATGCCTACCCTTATCCACATGTGTATTATTCACCTCCTCCTGCTCCTCCAGCCTATGGATTAAGCTATAACACAGCATATCCTATCTCAAGTGCTTCATATTATGTTGGGGCACCCATCATGCCCATGCATGCTTACGCCACTCCATACTCTAGACTGCCACCACCTCCTCCACCGTCTGATCCAATCAAGCAATATAGTGCAGATGATGATGATGAGGATGAGTACGAAGGTGGTGGATATTGCTCCATCATGTGA 897 0.4504 MAAKPAEEPPHGETLKYQTWVLKVLIHCDGCRKRVKKILQGIDGVYKTEVDSLQHKVTVTGNVDAETLIKRLSRSGRLVELWPEKPAEKKDNKKSGKSNKGGDINKEKEIQKNGEPGADGGSNEGSKDGGSNEGSKDGEDSDKEEHNDECEEGGDGDGGGGEGGKKKKKKKKKKNKGENGGSASVPPKNGEISKVDASVPSMAAKDLVNPPIQHAYPYPHVYYSPPPAPPAYGLSYNTAYPISSASYYVGAPIMPMHAYATPYSRLPPPPPPSDPIKQYSADDDDEDEYEGGGYCSIM* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0693 298 Gene3D - 16 89 - -
Vra3g0693 298 MobiDBLite consensus disorder prediction 80 197 - -
Vra3g0693 298 MobiDBLite consensus disorder prediction 262 298 - -
Vra3g0693 298 ProSiteProfiles Heavy-metal-associated domain profile. 26 81 IPR006121 GO:0046872
Vra3g0693 298 MobiDBLite consensus disorder prediction 262 276 - -
Vra3g0693 298 SUPERFAMILY HMA, heavy metal-associated domain 17 82 IPR036163 GO:0046872
Vra3g0693 298 PANTHER HEAVY-METAL-ASSOCIATED DOMAIN PROTEIN 1 298 - -
Vra3g0693 298 MobiDBLite consensus disorder prediction 80 114 - -
Vra3g0693 298 CDD HMA 26 76 IPR006121 GO:0046872
Vra3g0693 298 Pfam Heavy-metal-associated domain 26 76 IPR006121 GO:0046872
Vra3g0693 298 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 1 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0693 Vra-Chr3 7368012 7369581 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0693 - - var:108328166 446.047