Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0686 ATGGATTCTCGTTGCTTTGATGACTACAAAGAAGACGGTGAAGGTAGATATGCTGAAGGATTTGAAGACAAATTTGGAGATCCAGAAGTGCAGCCTCGCGTTGGGGAGGAATACCAAGCAGAAATTCCTCCATTGATTTCAGCACCTCATCGTTCTCTGCTTGTAAAGCAGATAAGAGATTCAGAAATCACGGTCAACTTGCAAGAGTGTATTTCACTAGGGCTTCCCATTCCTCTTAAGTGGGCACATTGCGAATTTGAAAGTAGTTCTGGTTACGGGAGTTTAGGATCTATCAGAAGCGAAGCGGGGCCAGCTATTTCTGAGAATGGATGCTCGGAAACTAAAGTGGAACTTTACGCTGCTTCACGCGGTGAAGAGACACATATAGGAGGGTTCTCAAATTTTGAACCATCTTCTAAAAGTGTTGAGAAGGATAAGATGAGAGGGAAGTATCTTCTCCCTGGATTGTTGGACGATCAATCTTGGACAAACACTGAATACAGCAGTTTTCTTCTTGGCCTCTATGTCTTTGGGAAGAAGCTTAATTTTTTGAAGAGATTTGTTGGGAGTAAAAGTATGGGAGACATATTGTCTTTGTATTACGGAAAGTTTTTTAAGTCTAAAGAATATTGTAGATGGGCAGAGTGCCGAAAGTTGAGAACTAAGCGCTGTATATATGGCCGGAAAATATTCACAGGATGGAGGCAACAAGAATTGCTGTCAAGATTATTTTCGTACTTGCCAAGGGAGTCTCACACTAGATTGCTTGAGATTTCAAGGAATTTTGGGGAGGGAAAGATGCCTTTTGAAGAATATGTGTTTTCTTTAAAGGATGCAGTTGGCATTGACTTGCTTATAGCTGCAGTAGGTATTGGTAAAGGGAAGCAAGATCTCACTGGCACTGCTGTTGAGCCAACAAAGACGAATCACATCTTCTCTGTTCGCCCTGAAATACCAATTGGCAAAGCTTGCTCCTCTCTTACATCTGCAGATGTAATCAAGTTTCTCACGGGAGATTTTAGGTTGAGTAAAGCTCGATCCAGTGATCTCTTCTGGGAAGCTGTTTGGCCTCGTCTTTTAGCAAAAGGCTGGCATTCTGAACAGCCTAAAGATGTTTCTGGATCAAAGCAGTCTTTGGTTTTTCTTGTGCCGGATATTAAGAAATTTTCAAGAAGGAAACTGGTAAAAGGTAGCCACTACTTTGATTCTATAAGTGATGTGTTGAATAAAGTAGCATCTGACCCTGGACTTCTTGAGACTGAAAGTCAAGCAACTGAGGGCAGTGTAGATAGGGAAAAAACTCCTGACAAACGAGACCTGGAGGGGGTGTCATGTGGGGAACAAGCTCAGTACCTTCAATCTCATCGTTCAAAGTGCAATCAAGATGTCAGGAAATTTACAATTGTAGATACCAGCATGGTTCATGATATGAATCAACGTAAAGTCATACAGATGAGAAGCTTACCTTCTGAAACTACAAATATATCTACCATCTCAAGCTGTTCTAGTGAATCTGAGAAAGATACATCTTACGAATCAAAAGATCAGGTTCAACAATATAGAGCTTTGAATGCTATCAAGGGTCATGTTGAGCAAGATAATGCTTCAAGTGCTATTGAAAACCAGGTTGAAAAATCTCATGTGTCAAGCTCTATTGATGAATGGGTCGAACAAGCTCATGCTTCAAGCCATATTCAACAAACTCATGCTTTGAGCCCTATTAAAGATCAGGTTGAACAAGCTCATGCTTCAAGCCTTATTGACGATCGGGTTGAACAAGCTCATGCTTCAGGCCCTATTAAAGATCGGATTGAACAAACTCATGCATCAAGCTCTGTTGAAGATCACTTTAAAAAAGCTAAGTCTTTGTATCCTATTGAAGGTCAGGTTGAACAAGGTAATTCCTCCAACCCTATTGAAGAATTCTCTTATAAGGGGTTGTGTATAGACTCATCAGATTGTATTTGCGTTCCTGAGGCCCACAGCATCAATAAAGACGGAAAATATCATAGATTTCATTCTGATTTGCATAGTGGTGAGCATTTAAGGGAGATGAATGAGCATTCCCTTATTCAAAAGATGACATCCGATTGCACAAATCCCTACATCACGGGAATGCAGAAGTTAAGAGCTTGTAACCATCAAGAAAATAGTCACTGCACTAAAAGTACTTCTGTGGATAGAAACTTTGATTTAAATGAACCAATCTCACCATCAAATCTGCAAGAAGCATCTGATGACATGGTTTTTTCTATGGGTTCTGGAAATTTGTCTTTACCAAATTATCTGGCTAAAGGCAGTCCGTCGAACATTAGCCATGAAGGTAGTGTCAGTGAGAACCGCCTGGTTAGAGAAGAGTCTGCAGAAAATTCTGAAAGCAGGATGTTGATTGACTTGAATTTTCCTCAAGTTGCACCTGATTTAGGACTTGAAATGGAAATACCATCCTCTGGGGCAACAGTGCAAAATGACAATCAATTTGCAAATGCATCATCTTCTCCATCTGAGATAACACAGTTCAATGCCTCACAGGAGTTTCCTGATGGAAACAACGAGCAGCAGTCTATCCTTGTCAACCGTCGTCAGAGCACTAGGAACCGACCGTTGACCACAAAAGCATTGGAAGCACTTGAGTACAGATTTATCAACTCAAAGAGGAAAAGAAAGAACACAGAATGTTCTGACAATAATCCAAAGTCCAAGTGTGTTCGTGTAAGTAGCGACACAATTGTTAGTGGCACTTGTGATGATGGCATTGAGGATTCTATGGTGGACACAAGAGCAGAGGAGGAGAATATTATCCAGGCATATAGTTATGGCATTGATCTTAATAGGGGCCCTCCGTAA 2847 0.4085 MDSRCFDDYKEDGEGRYAEGFEDKFGDPEVQPRVGEEYQAEIPPLISAPHRSLLVKQIRDSEITVNLQECISLGLPIPLKWAHCEFESSSGYGSLGSIRSEAGPAISENGCSETKVELYAASRGEETHIGGFSNFEPSSKSVEKDKMRGKYLLPGLLDDQSWTNTEYSSFLLGLYVFGKKLNFLKRFVGSKSMGDILSLYYGKFFKSKEYCRWAECRKLRTKRCIYGRKIFTGWRQQELLSRLFSYLPRESHTRLLEISRNFGEGKMPFEEYVFSLKDAVGIDLLIAAVGIGKGKQDLTGTAVEPTKTNHIFSVRPEIPIGKACSSLTSADVIKFLTGDFRLSKARSSDLFWEAVWPRLLAKGWHSEQPKDVSGSKQSLVFLVPDIKKFSRRKLVKGSHYFDSISDVLNKVASDPGLLETESQATEGSVDREKTPDKRDLEGVSCGEQAQYLQSHRSKCNQDVRKFTIVDTSMVHDMNQRKVIQMRSLPSETTNISTISSCSSESEKDTSYESKDQVQQYRALNAIKGHVEQDNASSAIENQVEKSHVSSSIDEWVEQAHASSHIQQTHALSPIKDQVEQAHASSLIDDRVEQAHASGPIKDRIEQTHASSSVEDHFKKAKSLYPIEGQVEQGNSSNPIEEFSYKGLCIDSSDCICVPEAHSINKDGKYHRFHSDLHSGEHLREMNEHSLIQKMTSDCTNPYITGMQKLRACNHQENSHCTKSTSVDRNFDLNEPISPSNLQEASDDMVFSMGSGNLSLPNYLAKGSPSNISHEGSVSENRLVREESAENSESRMLIDLNFPQVAPDLGLEMEIPSSGATVQNDNQFANASSSPSEITQFNASQEFPDGNNEQQSILVNRRQSTRNRPLTTKALEALEYRFINSKRKRKNTECSDNNPKSKCVRVSSDTIVSGTCDDGIEDSMVDTRAEEENIIQAYSYGIDLNRGPP* 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0686 948 PANTHER ATROPHIN-RELATED 1 934 - -
Vra3g0686 948 MobiDBLite consensus disorder prediction 767 792 - -
Vra3g0686 948 MobiDBLite consensus disorder prediction 425 441 - -
Vra3g0686 948 MobiDBLite consensus disorder prediction 778 792 - -
Vra3g0686 948 MobiDBLite consensus disorder prediction 1 29 - -
Vra3g0686 948 MobiDBLite consensus disorder prediction 419 441 - -
Vra3g0686 948 PANTHER ARGININE-GLUTAMIC ACID DIPEPTIDE REPEAT PROTEIN 1 934 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0686 Vra-Chr3 7316518 7322028 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0686 - - var:108329239 1800.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0686 3 7316518 7322028 Vra3g0686 3 7316518 7322028 ECH