Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0683 ATGATTTCTGCAGGAGGTAGGGATGCTATAAAGGGGCTGGGTTTAGGGTTGGGGTTAGGGCTGGGTGCTGGGAGGAGAGAGATGGTGGAGTCTGAGCTCGAAGAGGGTGAGGCGTGCTCCTTTCAGAACCACGAGGATTATGATGCCACCGTTGATCCCGATGTTGCCCTCTCTTACATTGATGAAAAAATTCAAGATGTTCTGGGACACTTTCAGAAGGATTTTGAGGGTGGGCTGTCTGCTGAGAGTCTTGGGGCAAAATATGGTGGTTATGGATCATTTTTGCCCACCTATCAGCGATCTCCTGTCTGGTCTCATCCAAGAACTCCACAAAAAAATCATAGTCAAAATACACCAAAATCTCCGAATAATTTGCTGCCAGAGGGTGGGCAGGGTGACGCTGTACAATGTTCCACTGGAACTCAGTCATCAAGACTTGGCCCAGGTTCTGGTAACTCTTTGAGGATGGCTGCAAACAAGGGTCTCTATCTGGAAGATGGAACCCATCAAGAAAAGTACTCGATAACCACTAATGTTGATACATCCACTTCTAAGCATGAGTCTCTAAACAAGAAATTTGCTAGCACATCGGACCAGAAGCCACTGAAGGTTCGAATCAAAATGGGTCCAGATAATTTATCAACACGGAAAAATGCTGCGATATACAGTGAAATTGGTCTGGATGTGTCACCATCATCATCACTGGATGACAGTCCCTCAGAAAGTGAGGGGATTTCTCGTGATCCTCATGAAACTCCTTTTGAATCTCCAACCATTATCCTTCAGATTATGACCGACCTCCCTCAGCTATTGTCACCACTTTCTGAAAGTATCATTGAATTAACCATAAAGGAAATGCGTGCCAAAGATAGCATTCCTGGTCTTGTTCATATGGATGATGCAGAAAGTTTTGACATGTCACTAAATGAATCTAATAATGTGAAAGTAGATAGAAAATTGTCACGGGGAAATGGTAGGAAAATGAAATCTCTGGAGGGTTGTGAATCCTCAATGGAAGTCAAGGGTTCTACAAAGAAGAATGGTCGGATTGATGCTGGAGTGTTGTCAAGAAAGGAACAAAGTACAGATGCATCAACTATGGAGGAGCTAGTTTCAAATACTATGAAGCTTCCACTTTTATCCAGTTCATATTCTTTCAGTGATGACTTGGTTAGGGCTGATGATGAGCCGTGTGACTCTTTGAAGGAAACCCACAAAGTTATGGTGAGGGAGAAAACCTTCTCTGGTCAGGGTCAAAAGGAAGGGCTGGAGCCAACATCTACTGAGGTGAATGGGTTTTCTGAAAGGACGAAGGGAAGCTCAAGAAGAAAAGTTGTGGGAGATAAGGTTCCTTTTGATGACTATATAGTGAAAGAAAATTCTCAAGGAGATAATAATTGCCACTCAATAATGGCTGAATCGAACGTTTCCAAAGTTAGGACAGCATCAAACACTGAAGAGCCTCCTAAGAAGGCTAATCAGAGAGGTAGCCTATCTGAACAAGACAGTATGGCAATACCTGTTGTGACAGAACATCCTGTTCAGGTTGGTAAGAAGAAGGCAAAGGGAAGTCATGACACCGTGGTTATGGAAAGGGAAAAAGAAAAGATCGGATCTTCTTCGGCTCCTAAAACAAAAAGGAGTTCTGATGATAGTTCTGCATCAAAAAATGAGAATGAAGATGTTAGAGCACAAAAGAGTCTTGGAAAGACTCGAGATACATACAGAGATTTCTTTGGAGAATTGGAAGATGAGGAGGACAGAATCGATTCGCTAGAGACCCCATTTGAAGAAAAACCAAAGGAACCTGAGGTGGCTGAGAGGAGTGCACCTACAACTAGTTCTGGAGCAAAGGAGAGACCAGGTGCTAAGAAAGCTGATAAGCTGTTAACAGCTGAAATATACCCTAAATCAGCCACAAATATTTGGTGCACTGGAAATGCAAATGGTACCGATGCTGAGAGTGGAAAAGGGATTCCTGTAATGATACCTCCTGTTGAGATGGAAGATAATTGGGTGCAATGTGACAGATGTCATAAATGGCGTCTTCTTCCTGTTGGAACAAATCCTGATAACCTACCCGAAAAGTGGCTATGTAGTATGCTTAATTGGCTGCCGGACATGAATCGGTGTAGCTTTAGCGAGGATGAAACCACTAAAGCACTTATTGCATTATACCAAGGACCTCCTTTTGATGGTCAAAGCAACCTGCAAAATGTCTCTGGCAGTGTTATGGTGGGAGGAGCCATGCCAACATCCCAGAATCCTAACCAGTACCAGCTAAATAATGATGTGCATGTGGCACCTGGGGGGAAGAAAAAGTTTGTGAAGGAGATACCAAATTCTACAAATAAAGAAAACTTTTCTCAATCCTCATATCCTATGAAGAAAAACTTCACGTCAGCAGTGAAAAGTAGGAGTTTAAATGATGTGAACAAATCTCCTGTCATGAGTGAGGCTGATGTTCCATCAGAGAAACACAAAAATAAGCACAGGACGCAGGAGCACAGTTCTGACAGAGGTGATACAAAGAATATGAAGGTCAAAAGCAGGAGGGATCATGATCAAGATTTTCCTAGGCCATCCAAGAAATCTAAGACTGACAAGGCTCATTCTACCAATGAAGAGTGGGTAGAACAGAGTGGAACTACTAGGAAGGTGGGTGTTCAAAGTTCAAATAGCACTTTTCCAACTACTTCAGTTGGCAAAGATCGACCAAGACAGAAATCCCACTCTTCTTCAAGGGACTCCAAATCAAGAAAAGACAGGATTCCAGTTTCTGCTGAAAACACAAGAGATAAAGGTCAGGGTTCGTTGGATGAGGGATCTCTGGATCTGGGGAATTGTGATTCAATTGGTAGTGTGAAAAAAAGGAAACTGAAGGGATATCAGGATGCTATAACTTACAGCCCAGGTAATCCTCGCATACAGGAGAGCAAAACTTCTGAGCATGATTTCAGTGATTCAAGGAAGGAAAAGAAGGCAAAAAGTTCAAAATCTGGAGGCAAAGAATCAAGTACCAGTAAAGGTAGTGGTAGAACTGACAAAAAAGTTAGTCATGCAAAGAACCAGAAATTCAGGCAAAACCCTGAGAGCAGTCTGTCACAGCGGAGCTTGGATGGCATGGACTGTTCAAAAAGGGACTTGGGGTCTTTACAGGTTTCTGTTGCTGCCACTTCAAGCTCTTCTAAGGTTTCTGGCTCTCACAAAACCAAAGCCAGCTTCCAGGAAGTGAAGGGCTCACCAGTGGAATCAGTGTCTTCATCACCCATCCGAGTTTTAAATCCTGATAAGCTTTCAAACAAGGAAATTATAGGGAAAGATGATTCACGTGATGTTGCTGCTTTGGATAGTCCAAGAAGATGCTCAAATCGTGATGATGATGGTGGAAGTGATCGATCTGGAACGGCCAGGAAGGATAAATCTTTCACCATTGCCAACAGGCCAGATTTTCAGGACAAGGGTGTTAATTTTTCTGATACTAAGCTTAAAGCTGAAACAACCAGCTATTGTACAAATGGTGGTGTTGACACCATAGTCCCAGATGGGACCTATGCAGGCAAAGAGCATATTAAACATCCAGGTGAAGATAAAACTGATGTTTATCATGCTAATATGTCTCATACAAGGAAGAATGGCATAGAATCAGGTTTGGAGGACAACAATGACGGCTGTAAGTCAGAGTCCCATGCAGATAAGGTCAAGAATGCTAGTTCTTCAAGTCAACTGAAAAATCAGTCTCCTCTAGGTGAGACAAAGCATAAGGATGGAAAAAATAAGTTGCAGGAGAAGTTTGGGATCAAGCCTGACCAAAGTGAGAATATACACGGTGTCAAGAAAGATTATGCAGAGAAAATTGAGGCTAGGAAAAAAGAGAATCACTTAAATCGAGGTCATGACTTTCAAGATGTTAGTGTGGATGTCCTTTGCAAACAGGATGCATTTCATGCTCCCCCACAGACTCAGTTGCCAGACTCGGATAGATCCACAAAGAGGTCTCTGTTGGAAAGAACTGGTGATCAAGAAGTGCATGGAAAAGGGAAGCTGTTGTCATCATTGCCATCTGAAGGATCTCAAGTTGAGACATCGGGCCGATGCCCACGACCAGTTGGTTTACATAAAGGAAATGGTGATGTTGAAGTTGACCCTTCCAAAGTTGATGATGTGTCAAAGCTGCCAAAAAGGCAATCGAAAAAGACTGATCATCAAAATGGAAATCAGCAAACTGGTTCAAGAAATCCTGTACTTAATGGTCACAGGTCGAAGGAGCTTGATGCCCCTAGCCCAGTTAGAAGGGATTCTTACAGCCATGCTGCTAACAATGCTGTGAAAGAAGCTAAAGATCTTAAGCATCTGGCTGATCGTCTTAAGCATTCTGGATCCACTGGTGAGAGCACTAGTCTTTACTTCCAGGCAGCCCTCAAATTTCTTCACGGAGCCTCTCTGTTAGAATCTGGCAACAGTGATAATTCTAAACACAGTGAGATGATTCAATCAAAACAAATGTATAGTAGCACTGCAAAATTGTGCGAGTTTTGTGCCCACGAATATGAGAAATCAAAAGACATGGCTTCAGCTGCACTAGCCTACAAATGCATGGAGGTAGCATATATGAGGGTAGTATATTCTTCACACACTAGTGCAAGCAGAGATCGGCATGAGTTGCACAATACACTGCAAATGATTCCTCTTGGTGAGTCTCCATCGTCATCTGCCTCTGATGTTGACAATGTTAACAACTCTACAGCTGCTGAAAAGGTTGTCACCATATCTAAGAGTGTCAATTCGCCCCAAGTAGCTGGAAACCATGTTGTTGCTGCACGACATCGTCCTAATTTTGTGCGATTGCTCGGTTTTGCTCAGGATGTTACTTTTGCCATGGAAGCATCAAGGAAATCACGGAATGCTTTTGCAGCTGCTAATTCAAGCCTAGGTGTGGGCAAGAATGCAGAAGGTATCTCCTCTATCAAAAAGGCTCTTGATTTTAGCTTTCAAGATGTGGAAGGGTTACTTCGTTTGGTACGGGTTGCTGTGGAGGCCATTAATCGTTAA 5052 0.4289 MISAGGRDAIKGLGLGLGLGLGAGRREMVESELEEGEACSFQNHEDYDATVDPDVALSYIDEKIQDVLGHFQKDFEGGLSAESLGAKYGGYGSFLPTYQRSPVWSHPRTPQKNHSQNTPKSPNNLLPEGGQGDAVQCSTGTQSSRLGPGSGNSLRMAANKGLYLEDGTHQEKYSITTNVDTSTSKHESLNKKFASTSDQKPLKVRIKMGPDNLSTRKNAAIYSEIGLDVSPSSSLDDSPSESEGISRDPHETPFESPTIILQIMTDLPQLLSPLSESIIELTIKEMRAKDSIPGLVHMDDAESFDMSLNESNNVKVDRKLSRGNGRKMKSLEGCESSMEVKGSTKKNGRIDAGVLSRKEQSTDASTMEELVSNTMKLPLLSSSYSFSDDLVRADDEPCDSLKETHKVMVREKTFSGQGQKEGLEPTSTEVNGFSERTKGSSRRKVVGDKVPFDDYIVKENSQGDNNCHSIMAESNVSKVRTASNTEEPPKKANQRGSLSEQDSMAIPVVTEHPVQVGKKKAKGSHDTVVMEREKEKIGSSSAPKTKRSSDDSSASKNENEDVRAQKSLGKTRDTYRDFFGELEDEEDRIDSLETPFEEKPKEPEVAERSAPTTSSGAKERPGAKKADKLLTAEIYPKSATNIWCTGNANGTDAESGKGIPVMIPPVEMEDNWVQCDRCHKWRLLPVGTNPDNLPEKWLCSMLNWLPDMNRCSFSEDETTKALIALYQGPPFDGQSNLQNVSGSVMVGGAMPTSQNPNQYQLNNDVHVAPGGKKKFVKEIPNSTNKENFSQSSYPMKKNFTSAVKSRSLNDVNKSPVMSEADVPSEKHKNKHRTQEHSSDRGDTKNMKVKSRRDHDQDFPRPSKKSKTDKAHSTNEEWVEQSGTTRKVGVQSSNSTFPTTSVGKDRPRQKSHSSSRDSKSRKDRIPVSAENTRDKGQGSLDEGSLDLGNCDSIGSVKKRKLKGYQDAITYSPGNPRIQESKTSEHDFSDSRKEKKAKSSKSGGKESSTSKGSGRTDKKVSHAKNQKFRQNPESSLSQRSLDGMDCSKRDLGSLQVSVAATSSSSKVSGSHKTKASFQEVKGSPVESVSSSPIRVLNPDKLSNKEIIGKDDSRDVAALDSPRRCSNRDDDGGSDRSGTARKDKSFTIANRPDFQDKGVNFSDTKLKAETTSYCTNGGVDTIVPDGTYAGKEHIKHPGEDKTDVYHANMSHTRKNGIESGLEDNNDGCKSESHADKVKNASSSSQLKNQSPLGETKHKDGKNKLQEKFGIKPDQSENIHGVKKDYAEKIEARKKENHLNRGHDFQDVSVDVLCKQDAFHAPPQTQLPDSDRSTKRSLLERTGDQEVHGKGKLLSSLPSEGSQVETSGRCPRPVGLHKGNGDVEVDPSKVDDVSKLPKRQSKKTDHQNGNQQTGSRNPVLNGHRSKELDAPSPVRRDSYSHAANNAVKEAKDLKHLADRLKHSGSTGESTSLYFQAALKFLHGASLLESGNSDNSKHSEMIQSKQMYSSTAKLCEFCAHEYEKSKDMASAALAYKCMEVAYMRVVYSSHTSASRDRHELHNTLQMIPLGESPSSSASDVDNVNNSTAAEKVVTISKSVNSPQVAGNHVVAARHRPNFVRLLGFAQDVTFAMEASRKSRNAFAAANSSLGVGKNAEGISSIKKALDFSFQDVEGLLRLVRVAVEAINR* 1684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0683 1683 MobiDBLite consensus disorder prediction 1213 1233 - -
Vra3g0683 1683 MobiDBLite consensus disorder prediction 228 253 - -
Vra3g0683 1683 PANTHER CW-TYPE ZINC FINGER 28 1681 - -
Vra3g0683 1683 MobiDBLite consensus disorder prediction 1249 1277 - -
Vra3g0683 1683 MobiDBLite consensus disorder prediction 102 154 - -
Vra3g0683 1683 MobiDBLite consensus disorder prediction 102 125 - -
Vra3g0683 1683 MobiDBLite consensus disorder prediction 1402 1416 - -
Vra3g0683 1683 MobiDBLite consensus disorder prediction 804 1156 - -
Vra3g0683 1683 MobiDBLite consensus disorder prediction 876 903 - -
Vra3g0683 1683 MobiDBLite consensus disorder prediction 1025 1040 - -
Vra3g0683 1683 MobiDBLite consensus disorder prediction 1009 1024 - -
Vra3g0683 1683 MobiDBLite consensus disorder prediction 1101 1147 - -
Vra3g0683 1683 MobiDBLite consensus disorder prediction 134 150 - -
Vra3g0683 1683 MobiDBLite consensus disorder prediction 1052 1095 - -
Vra3g0683 1683 MobiDBLite consensus disorder prediction 904 939 - -
Vra3g0683 1683 ProSiteProfiles Zinc finger CW-type profile. 666 719 IPR011124 GO:0008270
Vra3g0683 1683 MobiDBLite consensus disorder prediction 1316 1434 - -
Vra3g0683 1683 MobiDBLite consensus disorder prediction 323 346 - -
Vra3g0683 1683 MobiDBLite consensus disorder prediction 978 1000 - -
Vra3g0683 1683 MobiDBLite consensus disorder prediction 1329 1344 - -
Vra3g0683 1683 MobiDBLite consensus disorder prediction 477 625 - -
Vra3g0683 1683 MobiDBLite consensus disorder prediction 592 606 - -
Vra3g0683 1683 MobiDBLite consensus disorder prediction 1378 1401 - -
Vra3g0683 1683 MobiDBLite consensus disorder prediction 414 442 - -
Vra3g0683 1683 MobiDBLite consensus disorder prediction 1211 1277 - -
Vra3g0683 1683 MobiDBLite consensus disorder prediction 1234 1248 - -
Vra3g0683 1683 PANTHER CW-TYPE ZINC FINGER 28 1681 - -
Vra3g0683 1683 Gene3D - 663 721 - -
Vra3g0683 1683 Coils Coil 1439 1459 - -
Vra3g0683 1683 MobiDBLite consensus disorder prediction 549 582 - -
Vra3g0683 1683 MobiDBLite consensus disorder prediction 477 504 - -
Vra3g0683 1683 MobiDBLite consensus disorder prediction 419 435 - -
Vra3g0683 1683 MobiDBLite consensus disorder prediction 820 875 - -
Vra3g0683 1683 Pfam CW-type Zinc Finger 671 717 IPR011124 GO:0008270
Vra3g0683 1683 MobiDBLite consensus disorder prediction 515 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0683 Vra-Chr3 7284929 7296927 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0683 - - gmx:100806105 2603.55