Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0669 ATGACCACCCACACCAAGACCAACCTCGATGGAGTGCACTCTGATGTCAAGGTCGTCCAAAGACCAACCAAAGAAAAATCCCACGATCTCTTCCTGCGCTTTCTTGGCCTCTCACTCACTCTTGTTGCAACCATTCTTGTTGGTGTAGACAATGAAACCAAAGTCATCTCCTACGCTGAAATGAAATTCAGAGCCACTGCTAAGTGGGAATATATGTCTGCTATGGTGTTTTTCGTGGTGTCAAACGCAATAGCATGTTCATATGCAGCTGCATCATTGGTGATAACAGTGATGGCAAGAAGCAGTGGAACAAGAAAAAGCGATTTGACAGATTTGGTGATAACAGCTTTAGACCTTGTGTTGATGGCACTGTTGTTCTCAGCCAATGGTGCAGCTTGTGCAGTGGGAGTCATAGCGCAGAAAGGTAACAAGCACTTGCAATGGATGAAAGTGTGCGATGTCTTTGATGCTTATTGTCGTCACATGACAGCTGCATTGGTCCTCTCCATTATTGGGTCGACGGTGTTTCTCTTGCTGGTGCTTCATTCTGTTCTCAAACTCCATTACAGATCAAGAAGCTAG 582 0.4519 MTTHTKTNLDGVHSDVKVVQRPTKEKSHDLFLRFLGLSLTLVATILVGVDNETKVISYAEMKFRATAKWEYMSAMVFFVVSNAIACSYAAASLVITVMARSSGTRKSDLTDLVITALDLVLMALLFSANGAACAVGVIAQKGNKHLQWMKVCDVFDAYCRHMTAALVLSIIGSTVFLLLVLHSVLKLHYRSRS* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0669 193 TIGRFAM A_tha_TIGR01569: plant integral membrane protein TIGR01569 30 186 IPR006459 -
Vra3g0669 193 PANTHER CASP-LIKE PROTEIN 1E1 10 191 - -
Vra3g0669 193 Pfam Casparian strip membrane protein domain 26 173 IPR006702 -
Vra3g0669 193 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 10 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0669 Vra-Chr3 7200541 7201830 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0669 - - var:108328473 350.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0669 3 7200541 7201830 Vra3g0669 3 7200541 7201830 ECH