Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0664 ATGCAGGAGGAAGATAAGGCCGAGGGAGTCATAGTGGTCGGAGCAGGCCCCTCAGGCCTTTCCGCCGCCGCATGTTTAAGGAAGCAATCAATTCCGTTCATAATCATTGAGAGAGAAGACTGTTTCGCTTCTCTATGGAAGAAATACTCTTACGACCGTCTCCACCTCCACCTCAGAAAGCAGTTCTGCCAGCTTCCCCACAAGCCATTTCCACCCACTTTCCCTTCCTACGTTCCCAAGAACCAGTTCCTAGAGTACCTCGACGACTACGTCTCCCACTTCGCCATCGCGCCGCTCTATCGGAGGACGGTGGAGCTGGCCCAGTACGACGACGCCCGCCGCTGCTGGAGGGTGGAGGCCAGGAATGGGGAATCCGGCGAGGTGGAGAAGTACTGCGGGAGATTCCTGGTGGTGGCTACTGGGGAAACTAGCGACCCCTTTGTGCCGGCCGTGGAAGGGTTGAGTAGTTTCCCTGGAAAGGTGATTCATTCCACTAAGTTCAAGTCAGGGAAGGAGTTCAAAGACGAGCATGTTCTTGTTGTTGGGTCTGGGAATTCCGGCATGGAAATCGCTTTGGACCTTGTCAACCATGGTGCCAAAACCTCCATTCTTGTTCGAAGCCCGGTTCATTTTCTATCAAGGGGAATGGTAAGTTTAGGGTTGTTTCTGCTCAAGTATTTGTCGTTGAGCAGTGTGGACTTGTTGATGGTGATTCTCAGCACCATGGTTTACGGTGATGTGACTAAATATGGGGTTAGAAGACCCACTGAAGGACCCTTTTCCATGAAGAACAATCATGGAAAATATCCAATTATTGACGTTGGAACCTACGACAAGATAAAATCTCATGAATTAAAGGTTTTGGGAGCAGAAATAGAAAGCGTAAGAGGCAAGGATGTCCTATTCAAGAATGGAGAGTTACACCCATTTGACTCCATTGTTTTCTGCACAGGCTTCAAGAGATCAACCAACAAGTGGCTCAAGGGTGATGATTACCTTCTGAATGATGATGGTCTTCCAAAGCCAAAATACCCCAGCCATTGGAAGGGAAATAATGGTTTATACTGTGTTGGCCTATCAAGAAGAGGTTTCTATGGAGCTGCTGCAGATGCTGAAAATATAGCGAATGATATAAGCTTCTTCATGCAACAACCCTGA 1158 0.4845 MQEEDKAEGVIVVGAGPSGLSAAACLRKQSIPFIIIEREDCFASLWKKYSYDRLHLHLRKQFCQLPHKPFPPTFPSYVPKNQFLEYLDDYVSHFAIAPLYRRTVELAQYDDARRCWRVEARNGESGEVEKYCGRFLVVATGETSDPFVPAVEGLSSFPGKVIHSTKFKSGKEFKDEHVLVVGSGNSGMEIALDLVNHGAKTSILVRSPVHFLSRGMVSLGLFLLKYLSLSSVDLLMVILSTMVYGDVTKYGVRRPTEGPFSMKNNHGKYPIIDVGTYDKIKSHELKVLGAEIESVRGKDVLFKNGELHPFDSIVFCTGFKRSTNKWLKGDDYLLNDDGLPKPKYPSHWKGNNGLYCVGLSRRGFYGAAADAENIANDISFFMQQP* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0664 385 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Vra3g0664 385 PANTHER FLAVIN-CONTAINING MONOOXYGENASE 9 382 - -
Vra3g0664 385 Pfam Pyridine nucleotide-disulphide oxidoreductase 11 208 - -
Vra3g0664 385 SUPERFAMILY FAD/NAD(P)-binding domain 175 377 IPR036188 -
Vra3g0664 385 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 9 382 - -
Vra3g0664 385 PIRSF FMO 6 361 IPR000960 GO:0050660|GO:0050661
Vra3g0664 385 PRINTS FAD-dependent pyridine nucleotide reductase signature 10 29 - -
Vra3g0664 385 PRINTS FAD-dependent pyridine nucleotide reductase signature 177 195 - -
Vra3g0664 385 PRINTS Pyridine nucleotide disulphide reductase class-II signature 9 31 - -
Vra3g0664 385 PRINTS Pyridine nucleotide disulphide reductase class-II signature 173 197 - -
Vra3g0664 385 Gene3D - 2 384 IPR036188 -
Vra3g0664 385 SUPERFAMILY FAD/NAD(P)-binding domain 10 275 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0664 Vra-Chr3 7146301 7149975 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0664 K11816 - gmx:102668138 644.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0664 3 7146301 7149975 Vra3g0664 3 7146301 7149975 ECH