Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0660 ATGGTCGGGGTTTCTTCGCCTCACTCTCAAACTTCATCAACCCCTACCGGATATAAAGTTCAATTTGCAAGTGACGATGATCCATTTAGGCAATCTGATCTCTTTCAGGACACCTTGGCGCTCAATAGCCCTTTCACTGAAACGGAGTTTGAAAATCTCAATCTGGACACTGAGATTGTAGAGGATCCTGAGCCTGCAGAAGACATGGCAACAGGCAAAAGGTGCGAGTATGAACAATATGTTCTTGATAGCGAGGATGAAGAAATGAATGACAGACATGTTGGCAAAAAATTTCTTGAGGATGAAACTAGTCCAACAGTGAAAATTCCTTCGACACTCTTCCAGAAAAGACTGCCCAAGCCACCTCGTGAGCAAGTAGAAGCAAACGCCACCACTTCTGGGAACTCTACTGCTGAACATAATATGCTTGAAGACGACAAAAGAGCTGTAGTTGATTCGGACAGCTTTGATTACAACGACCGTTTATATCCACCTGCAACCCTAAATCACATTCAGTCACCAGAGCCTGGGAATTCAACCCAAGCTGCACTTGGCTTTGTGGATAAGTACTTGTCTTCAAATGATTTGGACTTGCTTCAAGGAATTCATTGTGGAAAGACCGCTAGGGAGAAATCACCCAATGTCCTGAATGCAAGAGGACCACTAAATCTTGCTAAGATTAAAGCCCGAACTAAAAATGAAGAGAAAGAACCTTTCAAATGGGTTGACAGTTGCCAACATGACAACAGAGGTCCTATGTTTGGTCAAAAGATTGAAGCATCATCAAGTTTTGGAAGATACAAACAGATATATACGAGAAAAAGGAAAAAAGGTAGCCATCTTCACAGCCAAGGAAACTGCAGTAAAAGTGATACGTTTGATGAGAAGTTAGGTCGAGGACCGAGAATCGCAATTGGAAATAATAACTCTCTCAAGGAATTGAATGTTCAACCAAGTTCTATAAGAGAGAATGCTAATGTTTATTCCAGTGTAACACATGCAGAGGACATGTCTGATATTGGTTTAGGCACTCAAATAGCTGCTGAAGCAATGAATGCCTTAGCTTTAATGCCCCCTTATGGCTGCCAGTTCAATGATACCCATCAACCAGACAATGCATTAGACGGCTCTTTGACTGATTTGCCGCAGAATGAAACTCATCTGAAAAATTCTTCAAATATTCCGAATCCTAGTTTACATTCTATGAAAATAAAATCAAATAAGAAAAATGCATCCTCCTCTAGATTTAGTAAAATTACTTCTAGCTCATCTTGCAAGCACACTTACAAACAGGAGTCAAATGTTGTCTCGGGAAAAATGAAAAAAATTATGAAGAGCAAGTCAACTGCTGAGGGGCGGTTTGAAAATAATATTAGTTTCCCAAAATACAGTAAACATGTATTGCTGGAAGAGGTTTGCCCACTGGGAGAATATACAAGTTTCCAACCTACTTCCGAAGAGGAATCCGAACATAGGAACAATGATAGTGGACATCCAAGAATCAAAGATCAACCAAGCCATCGTACAGAGGAGAACAGTAATTTCAAGGAGAAGGGTATTAAACACAAGAGAAAGGGAACTGGTTTAGTGGCTGATCCAGTGAAGTTGGGTGCAAGGGCTAAGCGTATTAAATTCCTTGGCAATTCATGTATGCTTGCTAAGAAAGTCAAGTTGAATCATCTGACTGAAGTTAGCCCACAGTTATCTGAAACCCGGAGTTTTTCATGGACTGATTCTTGGGCTTATCCAAAAAGACCAAGAGGGATAAGAAAGGGGGCTAATATGGGAACCAATCTCAATGCATCATCTGTTTTGTGTGTTGATGGAAAAGAAAACAATGTCTTCTCCACTAGAAGTCTAGAGGACCTGGCCAATGCTTCATGTGTAGATGATGGCAGATGCTTATTACAGGGGGGCTTTGTGCCACCAGGTTCATCTGGTGATGCAATGAAGGTACATAACTTTCCTGATATGCACCCTTTATTGTTGCCACATGTTGAAAGATCATCAAACAAAGGTGTTGCGCAATCAAGATCGGGAATTCGTGCTGCAGTTGTACCAAGTGAAGGTGTAAAAGTTTCAAATGTAAATCATTCATACACTGAGCGTCACAAAAAACTCTGTGTAAAAACCCAGCCTAGGTCTTCACTTTTGAAAGAGCTTACAAGATTAGGAGTTCCTGAGTCCATGTCAGATGTTTTGTGGAAAGATCTGAGACATCATAGAGATATGACAGACGTTCGAGTTCTGTTTAGTCAGCATTTGGATGACAGTATCATTAAGCGACAAAAAAAGATATTGAAACGTCTCAATATATCTGTTGCATCAAGTTCAATGGACGCCACACATTTCGTAGCTGACAAATTTACACGCACAAAGAATATGTTGGAAGCAATTGCTCTTGGGAAATTAATTGTGAATCACTTATGGCTTGAGAGCTGCGGACAAGCCAACTGTTTTATTGACGAGAAACATTACATTCTGAGGGATATGAAAAAGGAAAAGGAAATAGGCTTCAACATGCCGGTTTCTCTTGCTCTCGCAAGAGAAAAGCCACTCCTAAAGGGTAAAAGAGTTTACATCACGCCACATGTTAAACCTGATAAGGAACTGATTGCAAGTTTGGTCACAGCTGTTCATGGCCAGGTAGTAGATCAAAGTCAGGTGTGTGGTGACATGAAGGATAATATCTTTGATGATCTGTTGATTCTTTCTTGTGAAGACGACCATGCAATGTGCCACCGTTTATTTAAGAGAGGAACTGCAGTTTACAGTTCAGAGCTAGTTCTGAATGGAATTATAATCCAAAAATTGGAACTTGAGAGACATCAACTCTTGACGAATCAGGTTACAAGGAGTACCAATTGCCCAAGTACGTCTAATCGGTTTGGGAAGGTTTACAGAAGGCGTCAGAGGCTGATTTAA 2925 0.4065 MVGVSSPHSQTSSTPTGYKVQFASDDDPFRQSDLFQDTLALNSPFTETEFENLNLDTEIVEDPEPAEDMATGKRCEYEQYVLDSEDEEMNDRHVGKKFLEDETSPTVKIPSTLFQKRLPKPPREQVEANATTSGNSTAEHNMLEDDKRAVVDSDSFDYNDRLYPPATLNHIQSPEPGNSTQAALGFVDKYLSSNDLDLLQGIHCGKTAREKSPNVLNARGPLNLAKIKARTKNEEKEPFKWVDSCQHDNRGPMFGQKIEASSSFGRYKQIYTRKRKKGSHLHSQGNCSKSDTFDEKLGRGPRIAIGNNNSLKELNVQPSSIRENANVYSSVTHAEDMSDIGLGTQIAAEAMNALALMPPYGCQFNDTHQPDNALDGSLTDLPQNETHLKNSSNIPNPSLHSMKIKSNKKNASSSRFSKITSSSSCKHTYKQESNVVSGKMKKIMKSKSTAEGRFENNISFPKYSKHVLLEEVCPLGEYTSFQPTSEEESEHRNNDSGHPRIKDQPSHRTEENSNFKEKGIKHKRKGTGLVADPVKLGARAKRIKFLGNSCMLAKKVKLNHLTEVSPQLSETRSFSWTDSWAYPKRPRGIRKGANMGTNLNASSVLCVDGKENNVFSTRSLEDLANASCVDDGRCLLQGGFVPPGSSGDAMKVHNFPDMHPLLLPHVERSSNKGVAQSRSGIRAAVVPSEGVKVSNVNHSYTERHKKLCVKTQPRSSLLKELTRLGVPESMSDVLWKDLRHHRDMTDVRVLFSQHLDDSIIKRQKKILKRLNISVASSSMDATHFVADKFTRTKNMLEAIALGKLIVNHLWLESCGQANCFIDEKHYILRDMKKEKEIGFNMPVSLALAREKPLLKGKRVYITPHVKPDKELIASLVTAVHGQVVDQSQVCGDMKDNIFDDLLILSCEDDHAMCHRLFKRGTAVYSSELVLNGIIIQKLELERHQLLTNQVTRSTNCPSTSNRFGKVYRRRQRLI* 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0660 974 Gene3D BRCT domain 736 851 IPR036420 -
Vra3g0660 974 MobiDBLite consensus disorder prediction 480 524 - -
Vra3g0660 974 MobiDBLite consensus disorder prediction 1 25 - -
Vra3g0660 974 MobiDBLite consensus disorder prediction 1 20 - -
Vra3g0660 974 Gene3D BRCT domain 852 952 IPR036420 -
Vra3g0660 974 PANTHER BRCT DOMAIN-CONTAINING PROTEIN-RELATED 11 951 - -
Vra3g0660 974 SMART BRCT_7 741 818 IPR001357 -
Vra3g0660 974 MobiDBLite consensus disorder prediction 484 524 - -
Vra3g0660 974 Pfam Regulator of Ty1 transposition protein 107 BRCT domain 742 828 IPR001357 -
Vra3g0660 974 ProSiteProfiles BRCT domain profile. 739 828 IPR001357 -
Vra3g0660 974 CDD BRCT_MDC1_rpt1 747 821 - -
Vra3g0660 974 MobiDBLite consensus disorder prediction 275 301 - -
Vra3g0660 974 PANTHER PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 11 951 - -
Vra3g0660 974 CDD BRCT_PAXIP1_rpt6_like 853 939 - -
Vra3g0660 974 SUPERFAMILY BRCT domain 738 844 IPR036420 -
Vra3g0660 974 MobiDBLite consensus disorder prediction 115 147 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0660 K14972 - gmx:102659913 1353.58