Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0650 ATGGGTCGTTTGGCGACATTGTCGGAAGAACCCATAAACGAACAAGAGAAGAGAAGCAGGTCGTGTAAGAAATGGCGGAACTGGAATTGGATAAAGACGCACTTCTTCCACAAGAAACCTGACCTCAAGATCTTACTCAGCGTTCTCGCTTGCCCTCTCTTTCCTGTCCCTCCCCACTCCAAACCCCACGCCCCCCTCAACCAGCTCTCCTCCTCCGCTCAGTATATCATCCAACACTTCACCGCCGCCACCGGCTGCCGCAACCTCCCCACCACCGTCACAAATGTCTTCGCCACCGGGAAGGTCGAAATGTGGGTCGTTGACGACGTCGGCAACACCGGAGTCTCCGAGAGAGGCTGCTTTGTCATATGGCAAATGCTCCCCGACAAGTGGCAGATTGAGCTCGTCGCAGCAACTCAGAAGGTTGTCGCCGGTAGTGATGGCACCGTCGCTTGGCGCCACACCCCCTGGATTGGCGCACACGCCGCCAAAGGCGGCGTCCGTCCTCTTCGTCGCGCCGTTCAGGGACTGGACCCATTGGCAGTGTCTGCTGTATTCTGTGCGGCGCAATACATGGGAGAAAAAGAAATCTCAGGCATGGATTGTTTCGTGCTAAAGCTTTCAGCAGATCAGAAGGATCTGGTTGACCGGAGTGACAACACTGCGGAGATGATAAAGCACGTTGCATTTGGTTACTTCAGCCAGAGAAATGGACTACTGGTGCACCTAGAGGACTCTTACCTCACCAGGATTCAATCCCCTGGGACGCACCCCACTTATTGGGAGACCACAATGTCAACAAAAATTGATGATTACCGAATGGTTGATGGTGTGATGATTGCACATGCTGGCCATTCAACCGTGATCATCACAAGGTTTGGAGACAATCTAAAGACAGGCCCTGCCATCACGCGGTTGGAAGAGTCCTGGACCATTGATGATGTTGCATTCAACGTCCAAGGCCTGTCCATGGACTGCTTCATACCCCCCAAAGAACTCAACAAAGACTACCCTCAAGAACATCTAGATTGGAGATCACCCTTGCATACATGA 1053 0.528 MGRLATLSEEPINEQEKRSRSCKKWRNWNWIKTHFFHKKPDLKILLSVLACPLFPVPPHSKPHAPLNQLSSSAQYIIQHFTAATGCRNLPTTVTNVFATGKVEMWVVDDVGNTGVSERGCFVIWQMLPDKWQIELVAATQKVVAGSDGTVAWRHTPWIGAHAAKGGVRPLRRAVQGLDPLAVSAVFCAAQYMGEKEISGMDCFVLKLSADQKDLVDRSDNTAEMIKHVAFGYFSQRNGLLVHLEDSYLTRIQSPGTHPTYWETTMSTKIDDYRMVDGVMIAHAGHSTVIITRFGDNLKTGPAITRLEESWTIDDVAFNVQGLSMDCFIPPKELNKDYPQEHLDWRSPLHT* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0650 350 PANTHER LIPASE 2 340 IPR006873 -
Vra3g0650 350 Pfam Protein of unknown function (DUF620) 97 330 IPR006873 -
Vra3g0650 350 PANTHER GB|AAD30234.1 2 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0650 Vra-Chr3 7032759 7035466 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0650 - - gmx:100800778 659.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0650 3 7032759 7035466 Vra3g0650 3 7032759 7035466 ECH
Vra3g0650 3 7032759 7035466 Vra8g0206 8 2420005 2422973 PCT