Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0638 ATGGAACGTCAGGGTCATGATTATACAGCTGCATCTGCTATGGCATATGCTCAGCAACAGAGGCAAGCTGCTAATATGCAGCAACAACAGCAGCAGCAACAGTTTGGGTTTCATCCCCAGCATCAGCAGTTTCCTTCATCAATGCACGGTCCTCCTTTTATACCCCCAGGTCCAGGTCCTGCACACCCCCCTATGCAACAATTTCCGTATCATCATGCCTTGCAGCAGCAGCAGCCACTTCCACAATTACACCCTCATGCCCCTCCCCCGCCCCATCTCCTTCTTCAGCAGCAGCACCAAGGACCGCCTGCATTCCCTTCACATTATCCTCCTTCTCTTGTTCCGTCTCCTTTTTACGATTCTGCCCCACTCCCCGTCGCTCCTCCCTCTGATCCGGATCTCCACAAGCGAATTGACAAGCTTGTTGAGTATGCAGTGAAAAATGGCCCCGACTTTGAAGCTATGATATGTGAAAAGCAACGTGACAATCCTTCATATAGTTTCCTCTTTGGCGGGGAAGGCCACGGTTACTACCGTTATAAGCTTTGGTTGTCAACTCGTCCACCGGGTGGTCCATTCAACCCGCCTTTCCCGTCATCTTCCATGCCCATGATCCATCCCCCTCCAAATCCAATGATGAATCCGTCTCCTCTAAATGCTTCTCCAATGAATCCTGCAGGAATTGGGTCTTCACCTTCAATGCTAGGCCCACCTCCTTTCCAACAGTTCTATGATCAACAACACCACCATCAGCATCCTCAATCTTTTGCGCTTCCTGGGCGGCCTGAGTATGATCAGTCATCCAATTCTTTCAAAGGACCCTCTGGGCCACTTCCATCTGATATCGCAATGGAGCTCAGTAACGTTCTTAACAATTTAAATGGTACAAAAGAATCCATCAAAGGTGCAAAACTTTGGTTCATGCAGAGATCTCCATTTGCACCAGCCCTAGCAGAGGCTCTTAGAGACAGGGTCTTTGCATTGGATGAAGTCGAGAGACAGTTACACATAATATACCTTGCCAATGACATCCTTTTTGACAGCTTAAATAGGAGAACAAACGGCAATGACCTTGACAGTGAAGCTCTTGCCTTGAAACCAGTTTTAGGCTCCATGCTTGCAAGAATTTATCATAACCCACAAAGCAATGAGGAATACAGGAAAAGATTGCAGCAAATGGTGGAGTTCTGGGCCTCTAAAACGGTATACGATCAGGATACTATATCTTCACTTAAGGGTGAGATGATTGGTGGGCTGCAGACAAATCCTTTTCCTGGGGCTTCAAAGGATTTATCTTCTGCTTCAGCAGAATCAGTTGCAGGAGTTTTGCAGACACCTAACCATGTTGCCCAGCAGTGGCAAGCTGATAGGTTAGGCTCTGGTTCAAATATCTTAGATCAAGATCGTACTGATAAGCATGCAGCTCCAGCGCAGTCACTATCTGTACCCCTAGCAGCTCAGCAGTTTCTTCCAAATCCTGCTCCTCCTAGTGCCTTTCCTGGGTCCATGGCTATTCCATCTTCTGTTCAACCCGCTAACCAAGCACCTGTTGGTGTTCATTTATTGCCCCCTCCATCATCCAGCACCGGTGAACAATTGCCACCATATCCATTATTCCCACCTGGCCTCATTCCTGGAATGGTTAGAAAGATGCAGATCGGGAGTGGGGTTCCATATTCTCCTTTGAGCCCTTTGGATATCCCAACCATCATACCCCCGTCAACTGTGCCACCGTCTGAAATTCTTCAAAGAGTGTCAAAATTCTTTAAGGAAATTGGAGAGGTAAATCCTTCTGAGGGTCCTATGAATTCTGATTCAAGAGATGAAGATGATGAATATGATAGAGAATTTGAGAGGGAGCCAGCAGTACGAAAGGGAGGTGCTTGTATACCTCCACCTCCAAACTTGCAGGTTGATCCAGAGACAGGGACCTATGCTGATGGGACAGTAGAACGGAAACCTGGATCCAGTGGCTCGGGCAGGTTAGGGCTGGGGGCCACTGCCAATCCCAACGAGGTGAGTCAGTATGATGATGTATATACATCTTACAGGAAGCAGAGAAGCACCAATTACCATTCATCAATGAGTGCTAGAGCTGCAGCAAGATGA 2109 0.4765 MERQGHDYTAASAMAYAQQQRQAANMQQQQQQQQFGFHPQHQQFPSSMHGPPFIPPGPGPAHPPMQQFPYHHALQQQQPLPQLHPHAPPPPHLLLQQQHQGPPAFPSHYPPSLVPSPFYDSAPLPVAPPSDPDLHKRIDKLVEYAVKNGPDFEAMICEKQRDNPSYSFLFGGEGHGYYRYKLWLSTRPPGGPFNPPFPSSSMPMIHPPPNPMMNPSPLNASPMNPAGIGSSPSMLGPPPFQQFYDQQHHHQHPQSFALPGRPEYDQSSNSFKGPSGPLPSDIAMELSNVLNNLNGTKESIKGAKLWFMQRSPFAPALAEALRDRVFALDEVERQLHIIYLANDILFDSLNRRTNGNDLDSEALALKPVLGSMLARIYHNPQSNEEYRKRLQQMVEFWASKTVYDQDTISSLKGEMIGGLQTNPFPGASKDLSSASAESVAGVLQTPNHVAQQWQADRLGSGSNILDQDRTDKHAAPAQSLSVPLAAQQFLPNPAPPSAFPGSMAIPSSVQPANQAPVGVHLLPPPSSSTGEQLPPYPLFPPGLIPGMVRKMQIGSGVPYSPLSPLDIPTIIPPSTVPPSEILQRVSKFFKEIGEVNPSEGPMNSDSRDEDDEYDREFEREPAVRKGGACIPPPPNLQVDPETGTYADGTVERKPGSSGSGRLGLGATANPNEVSQYDDVYTSYRKQRSTNYHSSMSARAAAR* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0638 702 MobiDBLite consensus disorder prediction 1 67 - -
Vra3g0638 702 MobiDBLite consensus disorder prediction 13 47 - -
Vra3g0638 702 SUPERFAMILY Surp module (SWAP domain) 109 184 IPR035967 GO:0003723|GO:0006396
Vra3g0638 702 ProSiteProfiles CID domain profile. 278 419 IPR006569 -
Vra3g0638 702 SMART 558neu5 285 416 IPR006569 -
Vra3g0638 702 MobiDBLite consensus disorder prediction 80 112 - -
Vra3g0638 702 Gene3D - 283 418 IPR008942 -
Vra3g0638 702 SMART surpneu2 135 187 IPR000061 GO:0003723|GO:0006396
Vra3g0638 702 Gene3D Surp module 122 187 IPR035967 GO:0003723|GO:0006396
Vra3g0638 702 MobiDBLite consensus disorder prediction 662 696 - -
Vra3g0638 702 MobiDBLite consensus disorder prediction 246 276 - -
Vra3g0638 702 PANTHER SR-RELATED CTD ASSOCIATED FACTOR 6 127 700 IPR039037 GO:0006874
Vra3g0638 702 MobiDBLite consensus disorder prediction 593 702 - -
Vra3g0638 702 MobiDBLite consensus disorder prediction 49 65 - -
Vra3g0638 702 Pfam CID domain 285 411 IPR006569 -
Vra3g0638 702 ProSiteProfiles SURP motif repeat profile. 137 181 IPR000061 GO:0003723|GO:0006396
Vra3g0638 702 MobiDBLite consensus disorder prediction 261 275 - -
Vra3g0638 702 MobiDBLite consensus disorder prediction 82 96 - -
Vra3g0638 702 Pfam Surp module 138 183 IPR000061 GO:0003723|GO:0006396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0638 - - gmx:100816468 1061.6