Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0636 ATGGAGCGGGAGAAAAAAAACATGGCATCTCCTCTGCTGGAGCCTGTGCCTTCAAAGAGGGCTTCCAAGCTTCAAACATTGGGAAACATCATAGTCACCGTTGTCGGAACTGGAGTTCTTGGATTACCCTTTGCTTTTCGGATCGCTGGGTGGGTCGCTGGGTCGCTTGGGGTTGCTGTTGTCGGCTTATCCACTTACTATTGCATGCTTCTTCTTGTTAATTGCAGAGACAAATTGGCGTCTGAAGAGCCACTGGGGGAATCAAACACATATGGAGACTTGGGTTATAGGTCTTTCGGAACCCTAGGTCGGTTTGTGACAGAAGTTATAATTGTGGTAGCACAATGTGCTGGATCTATTGCTTATTTTGTGTTTATTGGACAAAACTTTCATTCTGTATTTGAAGGCCAAAACATATCAATGACCTCCTTCATATTTATGTTGGTACCTGTTGAGATTGGATTGGCTTGGATAGGGAGCTTATCTGCTTTGGCACCTTTCAGCATTTTTGCTGATGTTTGCAATGTCTTGGCTATGGGAATTGTGGTGAAGGAGGACGTACAACGGGCCTTCGGGGAGGGGTTTTCATTTGGAGAAAGGACAGCAATCACATCCAACATTGGGGGATTGCCATTTGCAGCAGGCATGGCAGTATTTTGTTTTGAGGGGTTTGGAATGACACTGGCTCTAGAGAATTCTATGCAGGATAGACGTAAGTTCCCAATATTGCTAGCTCAGACTTTTGGTGGGATAACTCTTGTGTACATTCTTTTTGGTTTTTGTGGTTACATGGCTTTTGGTGAAGAAACCAGAGACATTGTGACCCTCAATCTCCCAAGGAATTGGTCATCTCTTTCAGTGCAGGTAGGATTATGTGTTGGGCTTGCATTCACACTTCCAATCATGTTACACCCAATTAATGAGATTGTGGAAGGGAAACTCAAAATCATTTTCAGAAACAACAATGATTCAACGGGACCAGGAAATATCTGCATATGCATCAGCCGAGCGATTGTGGTGGTTGGACTGGCAGTGATAGCTTCATTCGTGCCAGAATTTGGTGTATTTGCCTCATTTGTGGGGAGTACCTTATGTGCAATGCTCTCATTTGTTTTGCCAGCCACATTTCACCTAAAGCTACTTGGCTCTTCTCTACCCTTCTGGCGTAAAGCCTTAGATTTTATTGTACTATTTTCTGGATTATTTTTTGCCATTTATGGAACTTACAACACAATAGTTGGAGTTTGA 1248 0.4335 MEREKKNMASPLLEPVPSKRASKLQTLGNIIVTVVGTGVLGLPFAFRIAGWVAGSLGVAVVGLSTYYCMLLLVNCRDKLASEEPLGESNTYGDLGYRSFGTLGRFVTEVIIVVAQCAGSIAYFVFIGQNFHSVFEGQNISMTSFIFMLVPVEIGLAWIGSLSALAPFSIFADVCNVLAMGIVVKEDVQRAFGEGFSFGERTAITSNIGGLPFAAGMAVFCFEGFGMTLALENSMQDRRKFPILLAQTFGGITLVYILFGFCGYMAFGEETRDIVTLNLPRNWSSLSVQVGLCVGLAFTLPIMLHPINEIVEGKLKIIFRNNNDSTGPGNICICISRAIVVVGLAVIASFVPEFGVFASFVGSTLCAMLSFVLPATFHLKLLGSSLPFWRKALDFIVLFSGLFFAIYGTYNTIVGV* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0636 415 PANTHER AMINO ACID TRANSPORTER 9 414 - -
Vra3g0636 415 Pfam Transmembrane amino acid transporter protein 20 412 IPR013057 -
Vra3g0636 415 PANTHER BNAA05G27230D PROTEIN 9 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0636 Vra-Chr3 6938033 6940811 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0636 11 415 Organic Solute Cotransporters AT3G11900 62.830 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0636 K14209 - gmx:100305659 712.605