Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vra3g0635 | ATGGTGAAAACAAAGCAGAAGCGCACAGGAAAAGTTCCTAGTAAAAAACGTGGTATTTCTTCCCATGACCCTGTTGATTCTCGAAACTGTGACAAAGAGCATGAGGATAGTGATTGGGTTATAGTGAAAAAGCAGAGAGTAACCATTCTGGTGCCTGCTGTGCCTCTCAATGAGAGATCGTTAACAACAAACCAAGGACCAAATCATACGCAACTTATGCCTCCTGAATTGGCAAGTAACCATGTGCAGCTTCCCATGGAGACATCTACTGTACATCCTTCAGATAATGAACATGAAAAAACCTTTTTATTGGCTGTCCAAAAAGAGATTCGTACCGAGAATAGAGCACCTCCTATCTTACCTAGACCAACTGTGGTCAGTCCATCATCTTTAGATCAGAGAACAGAATCAGAAAATCCACATCAAATGAATGGTTTGAAGTCACATAAAGTACTTGGAATTTCTAATACATCAAAAGTTATTAAGCAGCCCAGAACACTACTTGCACCAAGAAGGCCCTCCAACCTGGAAACTTTGAATAAAAACTTAAGAGCATCAAATCTGGAGAGGAAGCTTGAAAGAGCTGGTGGACTGAGCAAGTGGCTGATATCACTTGGACTGGGGCAGTTTGTGAGAATTTTTCAGGGTAAAAGTCTCAGTAAGTATCAGCTGGTAAATCTAACCATGAAAAAACTCAAGGATATGGGTGCCAATGCAGTGGGACCTCGCAGGAAACTGATCCATGCCATGGACTGTGTTTGTCAGCCATATTGCTTTGAGGCATAG | 786 | 0.4186 | MVKTKQKRTGKVPSKKRGISSHDPVDSRNCDKEHEDSDWVIVKKQRVTILVPAVPLNERSLTTNQGPNHTQLMPPELASNHVQLPMETSTVHPSDNEHEKTFLLAVQKEIRTENRAPPILPRPTVVSPSSLDQRTESENPHQMNGLKSHKVLGISNTSKVIKQPRTLLAPRRPSNLETLNKNLRASNLERKLERAGGLSKWLISLGLGQFVRIFQGKSLSKYQLVNLTMKKLKDMGANAVGPRRKLIHAMDCVCQPYCFEA* | 262 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vra3g0635 | 261 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - | |
| Vra3g0635 | 261 | SUPERFAMILY | SAM/Pointed domain | 197 | 255 | IPR013761 | - | |
| Vra3g0635 | 261 | Gene3D | - | 187 | 255 | IPR013761 | - | |
| Vra3g0635 | 261 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
| Vra3g0635 | 261 | PANTHER | SCP160 | 1 | 261 | - | - | |
| Vra3g0635 | 261 | MobiDBLite | consensus disorder prediction | 115 | 144 | - | - | |
| Vra3g0635 | 261 | CDD | SAM_superfamily | 198 | 249 | - | - | |
| Vra3g0635 | 261 | PANTHER | F26K24.15 PROTEIN-RELATED | 1 | 261 | - | - | |
| Vra3g0635 | 261 | MobiDBLite | consensus disorder prediction | 126 | 144 | - | - | |
| Vra3g0635 | 261 | MobiDBLite | consensus disorder prediction | 16 | 35 | - | - | |
| Vra3g0635 | 261 | Pfam | SAM domain (Sterile alpha motif) | 198 | 252 | IPR001660 | GO:0005515 | |
| Vra3g0635 | 261 | ProSiteProfiles | SAM domain profile. | 198 | 256 | IPR001660 | GO:0005515 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vra3g0635 | - | - | gmx:100804141 | 435.261 |