Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0633 ATGTCAAATTTCTCGTCATGGTTCTTTCGCTTACGATATTCTTCCTCCAAGCTCTTTTATCGCTACCGCACCCTCCACAATAAATACGAACCCACCGTCTTCAACAATCACTCTTCCAGGAACGCACGCTCAACTTCTCTGCTTCCTTTCGCTCTTGCTCTTTCCGCTGGATCATTCGCTCTTCATCCACACTTCAGTCCTTCCTTCTGCGACTCCGACAGAGGTGTGAATGTCGGGGGCAAAGGTAGCACGCAATACGTTGTTAAGGGATCACAGAAGGAATTTCCGCGGGAGCTTCTCGAGGAGTTGAAAATCATCTGTCAGGATAACATATCAGTTGATTATGACGAAAGGTATATCCATGGAAAACCACAAAACAGCTTTCACAAGGCTGTTAATATCCCAGATGTGATTGTTTATCCAAGATCTGAAGAAGAGGTATCTAAGGTTGTCAACTTATGTAACATTCATAAGGTTCCTATTGTACCATATGGCGGTGCTACATCAATCGAGGGTCACACCTTATCTCCTCATGGAGGGGTTTGCATTGACATGTCATTAATGAAGACTGTGAAAGCATTACATGTTGATGACATGGATGTTGTTGTTGAGCCTGGCATTGGATGGATGGAGCTCAATGAGTATTTGGAACCTTATGGACTATTTTTTCCACTTGATCCAGGTCCTGGTGCTAGCATTGGAGGCATGTGTGCTACACGTTGCTCTGGTTCATTAGCTGTGAGGTATGGAACTATGCGTGATAATGTCATCAGTCTCAAGGTGGTTCTTGCCAATGGAGACATTGTGAAGACTGCATCACGTGCCAGGAAGAGTGCTGCGGGGTATGACTTGACCCGCTTGATGATTGGAAGTGAAGGAACACTTGGTCTTATAACAGAAGTAACCCTGCGGCTTCAGAAAATTCCTCAGCATTCAGTGGTTGCAATGTGCAATTTTCCCTCTGTGAAGGATGCAGCAGATGTTGCTATTGCCACAATGAGGTCTGGTGTACAGGTGTCAAGGGTAGAGCTATTGGATGAAGTTCAAGTGAAAGCTATCAACATTGCTAATGGGAAAAATTTGCCTGAAAGTCCAACCTTAATGTTTGAATTTATAGGAACAGAGGCATATGCACGTGAGCAAACACAAATTGTTCGGAAAATTGTTTCTGAGCACAATGGCTCAGATTTTGTATTTGCAGAAGAACCTGAAGCAAAAAAAGAACTTTGGAAGGTAAGGAAAGAGGCACTCTGGGCTTGCTTTGCAATGGAACCTAATCTGGAGGCAATGATTTCAGATGTATGTGTTCCTTTATCTCACCTTGGTGATTTAATTTCAAGGTCTAAAAAGGAGCTGGATGCTTCACCACTAGTTTGCACAGTAATCGCTCATGCCGGAGATGGTAATTTCCACACGGTTATTCTATTTGATCCTAGCCAAGAAGAACATCGACGGGAGGCAGAGAGACTCAACCAATTTATGGTTCATGCTGCCTTGTCATTGGAAGGAACTTGTACTGGTGAACACGGTGTTGGCACTGGAAAAATGAAGTATCTTGAAGAAGAACTCGGAGTAGAAGCATTGAGGACAATGAAAAAGATAAAATCAGTCCTGGATCCCAACAATATCATGAATCCAGGAAAGCTAATTCCTCCCCATGTTTGTTTCTAG 1671 0.4339 MSNFSSWFFRLRYSSSKLFYRYRTLHNKYEPTVFNNHSSRNARSTSLLPFALALSAGSFALHPHFSPSFCDSDRGVNVGGKGSTQYVVKGSQKEFPRELLEELKIICQDNISVDYDERYIHGKPQNSFHKAVNIPDVIVYPRSEEEVSKVVNLCNIHKVPIVPYGGATSIEGHTLSPHGGVCIDMSLMKTVKALHVDDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGPGASIGGMCATRCSGSLAVRYGTMRDNVISLKVVLANGDIVKTASRARKSAAGYDLTRLMIGSEGTLGLITEVTLRLQKIPQHSVVAMCNFPSVKDAADVAIATMRSGVQVSRVELLDEVQVKAINIANGKNLPESPTLMFEFIGTEAYAREQTQIVRKIVSEHNGSDFVFAEEPEAKKELWKVRKEALWACFAMEPNLEAMISDVCVPLSHLGDLISRSKKELDASPLVCTVIAHAGDGNFHTVILFDPSQEEHRREAERLNQFMVHAALSLEGTCTGEHGVGTGKMKYLEEELGVEALRTMKKIKSVLDPNNIMNPGKLIPPHVCF* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0633 556 Pfam FAD binding domain 135 271 IPR006094 GO:0050660
Vra3g0633 556 Gene3D - 510 550 IPR016171 -
Vra3g0633 556 Gene3D - 93 328 IPR016169 -
Vra3g0633 556 Gene3D - 428 509 - -
Vra3g0633 556 SUPERFAMILY FAD-linked oxidases, C-terminal domain 313 552 IPR016164 GO:0003824|GO:0050660
Vra3g0633 556 PANTHER D-LACTATE DEHYDROGENASE 48 552 - -
Vra3g0633 556 ProSiteProfiles PCMH-type FAD-binding domain profile. 131 308 IPR016166 GO:0071949
Vra3g0633 556 SUPERFAMILY FAD-binding/transporter-associated domain-like 103 309 IPR036318 GO:0050660
Vra3g0633 556 PANTHER D-LACTATE DEHYDROGENASE, MITOCHONDRIAL-RELATED 48 552 - -
Vra3g0633 556 Pfam FAD linked oxidases, C-terminal domain 308 549 IPR004113 GO:0003824|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0633 Vra-Chr3 6904890 6914606 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0633 K00102 - gmx:100803612 1004.59