Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0620 ATGTTTGCGCAGCTGCTGATACTTTCTGCCAACACACTCTTAGGAGCGAGTTTTAAAATCGCAGGACGTTGTTCTCAAGGTTTAAGCAGTTCTAGATTTTTATCATACCAGTTGAAAGAATTTCTAAGAGCTAAAATGGAATCTGATGCACTGGCATGGGGAGATAAACTCGTACTGAGGGGATTGTCATTCCATGGCTTTCATGGAGCAAAGCCAGAAGAAAGGAAACTAGGCCAGAAGTTCGTGGTAGATATAGATGCTTGGATGGATCTTGCAGCTGCTGGAAAAACTGATCACTTATCAGATACAGTCAGTTACACAGCAATATATGATATAGCCAAGGAAATTCTTGAAGGGACACCTCACAACCTTCTGGAATCAGTGGCCCAAAAAATTGCAATAACTACTCTGACAAATCATAAAGAAATTTTAGCTGTTCGAGTGAAGGTTGGAAAGCCTCATGTGGCAGTTCGAGGTCCAGTTGAGTACTTAGGCGTTGAGATTTATAGACGGAGGAGCGATTTGTCAGGCTAA 534 0.4195 MFAQLLILSANTLLGASFKIAGRCSQGLSSSRFLSYQLKEFLRAKMESDALAWGDKLVLRGLSFHGFHGAKPEERKLGQKFVVDIDAWMDLAAAGKTDHLSDTVSYTAIYDIAKEILEGTPHNLLESVAQKIAITTLTNHKEILAVRVKVGKPHVAVRGPVEYLGVEIYRRRSDLSG* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0620 177 SMART FolB_2 57 170 IPR006157 GO:0004150|GO:0006760
Vra3g0620 177 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 55 172 - -
Vra3g0620 177 Gene3D - 54 175 IPR043133 -
Vra3g0620 177 PANTHER DIHYDRONEOPTERIN ALDOLASE 1-RELATED 52 173 IPR006156 GO:0004150|GO:0006760
Vra3g0620 177 TIGRFAM folB_dom: FolB domain 55 172 IPR006157 GO:0004150|GO:0006760
Vra3g0620 177 PANTHER 7,8-DIHYDRONEOPTERIN ALDOLASE 52 173 - -
Vra3g0620 177 CDD DHNA_DHNTPE 55 171 IPR006157 GO:0004150|GO:0006760
Vra3g0620 177 Pfam Dihydroneopterin aldolase 58 168 IPR006157 GO:0004150|GO:0006760
Vra3g0620 177 TIGRFAM folB: dihydroneopterin aldolase 55 169 IPR006156 GO:0004150|GO:0006760
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0620 Vra-Chr3 6791538 6795926 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0620 K01633 - var:108334837 244.202