Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0607 ATGGAAACTATTGATAAAGAAGAAAAAATTGCTTGTGTGATTGGTGACCGATTAACTAGTGATGTTATTGTGAGGCTACGCACTCCGGAAGGTCGAGATGATTGGCTATATTGCCACTCTGAGACTCTTGTAAAAAATTGCAAGTACTTTGCGGATAGGTTGTCTGAGAACTGGCCAACATGTCAGATCCTTGATTCGCGCAATTGTGTCGATATCTATTGCCAAGAGTTGGATTTTGATTACCATGTAAATCTTATACGTCTTCTCTACATTGTCATAGATGGTTCAGTTGATGATTTGTGGCATGGTGTTAGAAATGCCCTTGGCATTCTCCAGGTCGCAGTTGAACTTGGATGCCCGCAGATAATAACTGCATGTGTGAACTACTTAGAAGCTGTTACATGGGAGGAGGCTGAGGAGGAAGAGATCTTGAGAATTGTACCTCGAATGGGATTACAGGCTGAACCTATCCTAGCTAGACTTCAACCAGTTAAGCAGTCTGCTATCATAAATATCTTTGTCTCTGCTATCCGTTTTTCTACGTCATCCCCATCCCCAAATATGAATGATCTTAAATCTTCAGCACAAGAGCAACTTGAGTACATGCTAACTGAAGATGACGATGCCCCTTTATTGACAGCTGATGACAACATAAAAGTCGAAGTAAAAGAATGTGTAAACAGACTATTTGCCCGGTTTATAGAATCGGTAACAGCTTTTTTCTCCGGTACTACAGAGTCACTCTCTGAGGCGGGAAATGTTCAGTTGTTTCAGTCCTATCTGACTGATTTGTCGTGGGCCTGTCAGATATTGAGTAAGTTGGAAATAATGAGAGAATTCGTTGAGTATTGGTCCGATGCTTCAGAAAAAATTGTCAAGGTTCTTGAACAAGGAAGTTCTACAACTGAAGTCATTGAGATAAAGTTAAGAGCTGTTGAGGTGACATCAAAGGTTTTAGAGGCAATTGGTTATGGCACTGTTATATTGCCAACAGCAAAACGCCTTCAAGTTTTGAAAGTGTGGCTTCCGTTTGTAAGGGTTACTAAACCATTGATTGATTCTGTTACAACGAATTGTGAGAATGCCATTCTGCTTAAATTAGATGGCGAAATGTGGCAATCCCTAGAATCCACCTTTGTATCTATAATTCTTGCATTGCCATCTGGGGATCAGGCAGATATCTTAACCGAGTGGCTGGATAACGAGTATATGCAGTATCCAGACTTAACTGAGGCATTTGAAGTATGGTGTTATAGGTCCAAGGTTGCTAAAAGAAGACTATCATTGGTAGGGGATGAGCATGCCATGACCAACTCATTTTGA 1323 0.4074 METIDKEEKIACVIGDRLTSDVIVRLRTPEGRDDWLYCHSETLVKNCKYFADRLSENWPTCQILDSRNCVDIYCQELDFDYHVNLIRLLYIVIDGSVDDLWHGVRNALGILQVAVELGCPQIITACVNYLEAVTWEEAEEEEILRIVPRMGLQAEPILARLQPVKQSAIINIFVSAIRFSTSSPSPNMNDLKSSAQEQLEYMLTEDDDAPLLTADDNIKVEVKECVNRLFARFIESVTAFFSGTTESLSEAGNVQLFQSYLTDLSWACQILSKLEIMREFVEYWSDASEKIVKVLEQGSSTTEVIEIKLRAVEVTSKVLEAIGYGTVILPTAKRLQVLKVWLPFVRVTKPLIDSVTTNCENAILLKLDGEMWQSLESTFVSIILALPSGDQADILTEWLDNEYMQYPDLTEAFEVWCYRSKVAKRRLSLVGDEHAMTNSF* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0607 440 Gene3D Potassium Channel Kv1.1; Chain A 6 152 IPR011333 -
Vra3g0607 440 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 4 437 IPR038920 -
Vra3g0607 440 PANTHER OS07G0668800 PROTEIN 4 437 - -
Vra3g0607 440 SUPERFAMILY POZ domain 17 130 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0607 Vra-Chr3 6643565 6645883 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0607 - - gmx:100797958 811.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0607 3 6643565 6645883 Vra3g0607 3 6643565 6645883 ECH