Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0604 ATGGCGACGCATCCGCAAACTCCGACCTCATCGAACGCCTTCTCCTTCCTGTCGAAGGGCTGGCGCGAGGTTCGAGACTCAGCGGACGCTGATATCCAACTCATGCGTGACCGAGCGAACTCGTTCAAAGACCTAGCGACGTCATTCGACCGCGAGCTCGAGAACTTCTTCAATTCCGCAACGCCGCCGTTCTCGGTTCCGGCCATGCGCTCTCCGCCGCCGAGGGAGATCGAGTTCGTCAAGAGTCTACGCCCGAAGCTGTCGGAGATTCGACGCGCCTACTCCTCACCCGATTTCAGCAAGAGGGTTCTGGAGAAATGGAGCCCGAGGTCGCGGATTCGAATCGACCTTTCCGCGATAAAGAAGGCTATTGTGTCGGCGGAGGAAGATGGGATTGTGGATTTCGAGAAGAGGGGAAGGAGGTTGAGTTTCTGGGAGGAGTGGAAAAACGAAGGCGAGGGTGAATCGAAGGACTGGGAGCCGATTCGTGCACTGAAGATCAGGCTCAAGGAGTTTGAGAAGCGCGGTTCTTCTTTTGAGGCTTTCAAGAACAGTGAATTCTTGGAGAAAGTCAAGTCTGGCTTGAAATCAATGTGCAAGGAACCTGAGGAGTCAAAGGAAGTGCCACCATTGGATGTACCCGAACTTCTTGCCTACTTTGTAAAACAGTCTGGGCCATTTTTGGACCATCTTGGAGTGAAAAGAGACGTATGTGACAAGATAGTTGAAAGTTTGTATAGCAAACGCAGAAACCATCTTCTATTGCAATCCCTGTCTGGGGAAGAGTCTTCTATTGTTGGGAATGGAAACATAAATGATGAATTGGACTTACGAATAGCAAGCGTCCTTCAGAGCACAGGACACCGTCACGAAGGTGGATTCTGGACAGACCATGCTAAGCATGATCCGTCTGATAGTGAAAGACATGTTGCAATAGTCACAACTGCTAGTCTTCCTTGGATGACAGGAACAGCTGTAAACCCCCTATTTCGAGCTGCATATTTATCACAATCTGCAAAGCAGAAAGTCACTCTGTTGGTTCCATGGCTTTCTAAATCAGATCAAGAGCTTGTTTATCCCAGCAGTCTTACTTTTACTTCACCAGAAGAACAGGAAGTTTACATACGTAGCTGGCTTGAAGAAAGGATTGGTTTTAAGGCAGACTTCAAAATTTCTTTTTATCCTGGGAAGTTTTCAAAGGAAAGACGGAGTATAATACCTGCTGGAGATACTTCTCAATTTATACCATCCAAGGATGCTGACATTGCTATCCTGGAAGAGCCGGAACATTTAAATTGGTATCATCATGGCAAACGTTGGACTGACAAATTCAACCATGTTGTTGGTATTGTTCACACAAATTACTTGGAATATATCAAGAGGGAGAAAAATGGAGCGCTCCAGGCATTCTTTGTGAAACACATAAACAACTGGGTTACAAGAGCATACTGCCACAAGGTTCTTCGTCTTTCAGCTGCTACTCAGAATTTACCCAAGTCTGTAATTTGCAATGTTCATGGTGTGAATCCAAAGTTCTTGGAAATTGGAGAAAAAATTGCTGCAGAGAGGGAGCTTGGGCAGAAATCCTTTACAAAAGGGGCGTATTTCTTGGGAAAGATGGTGTGGGCAAAGGGATATAAGGAGTTGATAGATTTATTAGCAAAGCATAAGGCTGACCTTGATGGCTTCAAGTTGGATGTGTTTGGAAATGGAGAGGATGCTAATGAAGTTCAGAGTGCAGCTAGGAAGTTAGATTTGAATCTCAGCTTTCAAAAAGGAAGAGATCATGCAGACGATTCTCTTCACGGGTACAAAGTTTTTATAAATCCTAGCATTAGCGATGTGCTATGCACTGCTACAGCTGAGGCACTTGCCATGGGAAAATTTGTAGTTTGTGCAGATCATCCGTCAAACGAGTTCTTCAGGTCATTTCCCAACTGTTTGACGTACAGGACGTCCGAAGACTTTGTGGCAAAAGTAAAAGAAGCATTAGAAAACGAGCCGTATCCTCTAACACCTGAGCAAAGATATCAACTTTCTTGGGAGGCCGCTACTCAAAGATTTATGGAATATTCTGAGCTTGATAGCATCCTGAATAAGGAAAATAATGGTGAAAAATCAAGCCTAGATAAAGGAAAGCTCGTTCCCAAGTCAGTTTCAATGCCTAATCTGACGGAAATAGTAGATGGAGGCTTAGCATTTGCTCACTATTGTCTCACCGGGAATGAATTCCTGAGATTATGCACAGGAGCAATACCTGGGACACGTGACTACGATAAACAGCACTGTAAAGACCTTCATCTTTTGCCGCCGCAGGTAGAAAATCCCATCTATGGCTGGTGA 2343 0.4524 MATHPQTPTSSNAFSFLSKGWREVRDSADADIQLMRDRANSFKDLATSFDRELENFFNSATPPFSVPAMRSPPPREIEFVKSLRPKLSEIRRAYSSPDFSKRVLEKWSPRSRIRIDLSAIKKAIVSAEEDGIVDFEKRGRRLSFWEEWKNEGEGESKDWEPIRALKIRLKEFEKRGSSFEAFKNSEFLEKVKSGLKSMCKEPEESKEVPPLDVPELLAYFVKQSGPFLDHLGVKRDVCDKIVESLYSKRRNHLLLQSLSGEESSIVGNGNINDELDLRIASVLQSTGHRHEGGFWTDHAKHDPSDSERHVAIVTTASLPWMTGTAVNPLFRAAYLSQSAKQKVTLLVPWLSKSDQELVYPSSLTFTSPEEQEVYIRSWLEERIGFKADFKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGIVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCHKVLRLSAATQNLPKSVICNVHGVNPKFLEIGEKIAAERELGQKSFTKGAYFLGKMVWAKGYKELIDLLAKHKADLDGFKLDVFGNGEDANEVQSAARKLDLNLSFQKGRDHADDSLHGYKVFINPSISDVLCTATAEALAMGKFVVCADHPSNEFFRSFPNCLTYRTSEDFVAKVKEALENEPYPLTPEQRYQLSWEAATQRFMEYSELDSILNKENNGEKSSLDKGKLVPKSVSMPNLTEIVDGGLAFAHYCLTGNEFLRLCTGAIPGTRDYDKQHCKDLHLLPPQVENPIYGW* 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0604 780 Pfam Glycosyl transferases group 1 535 669 IPR001296 GO:0016757
Vra3g0604 780 PANTHER DIGALACTOSYLDIACYLGLYCEROL SYNTHASE 2, CHLOROPLASTIC 8 780 IPR044525 GO:0046481
Vra3g0604 780 CDD Glycosyltransferase_GTB-type 439 641 - -
Vra3g0604 780 Gene3D Glycogen Phosphorylase B; 532 686 - -
Vra3g0604 780 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 310 690 - -
Vra3g0604 780 PANTHER DIGALACTOSYLDIACYLGLYCEROL SYNTHASE 1, CHLOROPLASTIC 8 780 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0604 Vra-Chr3 6591508 6597581 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0604 12 602 Glycosyltransferase AT3G11670 68.750 0.0 832
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0604 K09480 - gmx:100796354 1491.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0604 3 6591508 6597581 Vra3g0604 3 6591508 6597581 ECH