Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0600 ATGGATCCATCCCATGATGGCAGAGAACATCATCCAAAAGGATCTTTCTCCTATGAGCCCTCTTCCCACATGCACGGTCATGGTTCACAATCACCATCCATGGCGGCACCACCAAACATGATGTATTACTCACCAGGAATGGGATACGAGCCACCTCTCAAAGGTTATCCTCCAAGATATGACCCATACCCTAATGACTACCCTCCACAACCTCCAAGATATGACCCATACCCTCCACAACCTCAAGTATACCATTACCCCGCAGGCCCATACTTCAACGATCCACCCACCCATCACGACACTGGTGAAAACAAAGCCTTCTATCGTGGTTTCCTAATATGTTGCTGTGTATTATTAACCGGCCTCTTCGTTGCCACCCTTGTCATGGCGCTAATTATGCACCCCAAACTACCCACTTACACCGTTAATTCCCTCTCCGTCGCCAACTTCAACGCCTCTACTACGCTAACCGCGGATTGGAACACCACCTTCTCCATTCAAAACGTCAACGACAAGCTTAGCGGGTTCTTATCCGACTTCAAGGTGGATCTGTTGCACAAAAACGACGTTTTAGCTATGAGTTACGTACCCGATTTCGAGTTGGACAAGAAGGAGGTTAAGCGAATCGACTCGAAGATGTCGTCGATTGGGTTTTCGTTTTTGACGCCGGACATGCATGAGATGGTGAAGGAACAAGCCAGTGGCTCCGTTTCGCTCATTCTGAGGATTGCTTCCATGGTGGAGTTCAAGTCTAGCACATTTACCACAAGAATGTCGTTGGTACTAGCGATTTGTGACGGCTTGAAGGTTGTCTTTCAGAACAAGACCGGTAACGGCGAGTTGGACAATGAAGGAAAGCCCATTAGTTGCCAACTTTATATGTGA 885 0.478 MDPSHDGREHHPKGSFSYEPSSHMHGHGSQSPSMAAPPNMMYYSPGMGYEPPLKGYPPRYDPYPNDYPPQPPRYDPYPPQPQVYHYPAGPYFNDPPTHHDTGENKAFYRGFLICCCVLLTGLFVATLVMALIMHPKLPTYTVNSLSVANFNASTTLTADWNTTFSIQNVNDKLSGFLSDFKVDLLHKNDVLAMSYVPDFELDKKEVKRIDSKMSSIGFSFLTPDMHEMVKEQASGSVSLILRIASMVEFKSSTFTTRMSLVLAICDGLKVVFQNKTGNGELDNEGKPISCQLYM* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0600 294 MobiDBLite consensus disorder prediction 1 16 - -
Vra3g0600 294 MobiDBLite consensus disorder prediction 22 37 - -
Vra3g0600 294 PANTHER PROTEIN, PUTATIVE-RELATED 61 291 - -
Vra3g0600 294 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 61 291 - -
Vra3g0600 294 MobiDBLite consensus disorder prediction 1 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0600 Vra-Chr3 6543603 6546320 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0600 - - vra:106757498 553.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0600 3 6543603 6546320 Vra8g0133 8 1498618 1499457 PCT