Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0590 ATGGCTTCCTCCGCTCCTTCTGCTTCTCTCATCTCCTCAAACCCTAACATTCTCTTCTCTCCCAAATTCCCTTCTTCTTCTTCCTTTTCTTCCCTCTCCTTCCCCAATTCCTCCAATTCCATTTTCAAACCTTTACGCACTTCTCTTAATCCCTCATCTCCCGCTCTCAAACCCCTCGTTGCCAGGGCTTCGAGTGAACTTCCATTAGTTGGGAACACAGCACCGGATTTTGAAGCAGAGGCTGTTTTTGATCAAGAGTTCATCAAGGTCAAACTATCTGAATATATTGGGAAAAAATATGTTATCCTCTTTTTCTACCCATTGGATTTCACATTCGTTTGCCCGACAGAAATCACCGCCTTCAGTGACCGGCATGCAGAGTTTGAGGAACTAAACACAGAGATTTTGGGTGTTTCAGTTGACAGTGTGTTTTCACACCTTGCATGGGTTCAAACTGATAGAAAGTCGGGTGGTCTTGGCGACTTGAAGTATCCTTTGATTTCTGATGTCACCAAATCCATCTCGAAATCTTATGGTGTTCTCATTCCCGATCAGGGGATTGCATTGAGAGGATTGTTCATTATTGACAAGGAAGGGGTTATTCAGCATTCTACCATTAACAACCTGGCCATTGGTAGAAGTGTTGATGAGACAAAGAGAACACTCCAGGCCTTGCAGTATGTGCAGGAGAACCCAGATGAAGTTTGCCCAGCTGGGTGGAAGCCTGGTGAGAAGTCCATGAAACCAGACCCTAAACTTAGCAAAGAGTACTTCTCTGCTATTTAG 786 0.4453 MASSAPSASLISSNPNILFSPKFPSSSSFSSLSFPNSSNSIFKPLRTSLNPSSPALKPLVARASSELPLVGNTAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITAFSDRHAEFEELNTEILGVSVDSVFSHLAWVQTDRKSGGLGDLKYPLISDVTKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETKRTLQALQYVQENPDEVCPAGWKPGEKSMKPDPKLSKEYFSAI* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0590 261 Pfam AhpC/TSA family 70 203 IPR000866 GO:0016209|GO:0016491
Vra3g0590 261 PANTHER THIOREDOXIN PEROXIDASE 46 261 - -
Vra3g0590 261 Pfam C-terminal domain of 1-Cys peroxiredoxin 224 259 IPR019479 GO:0051920
Vra3g0590 261 Gene3D Glutaredoxin 62 261 - -
Vra3g0590 261 SUPERFAMILY Thioredoxin-like 68 259 IPR036249 -
Vra3g0590 261 CDD PRX_Typ2cys 70 243 - -
Vra3g0590 261 ProSiteProfiles Thioredoxin domain profile. 68 227 IPR013766 -
Vra3g0590 261 PANTHER 1-CYS PEROXIREDOXIN PER1 46 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0590 Vra-Chr3 6476448 6478999 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0590 K03386 - jre:109013543 407.142