Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0577 ATGGCATTTGAATTGCACTTCACACTCATATTCTTTTCTCTGTTTTCGGTGTCCTCTTTCACCTTTCCTTTGCCCCCTATTCTACCCAGATTTCCCTCTTCAATAGTCAGTGCAGAGCTAAAGCAACGCTCTCATTCTGCTCCAAATACCCCATACAAAACCAAGTTCTTCACTCAAATACTCGATCACTTCAATTTCAATCCCCAGAGCAATCACGTTTTTCAACAAAGGTATCTCATCAATGATACCTTCTGGGGTGGTGCCAAAAACAATGCTCCAATCTTTGTCTACACTGGAAATGAAGGGAACATAGAATGGTTCACTCAGAACACAGGCTTCATGTTCGAAAATGCTCCTTCTTTTCATGCCCTTTTGCTTTTTATTGAGCATAGATTCTACGGAAAATCAATACCATTTGGGGGAAACAGGAAGGTTGCATACGCAAATGCTACCACACTGGGGTATTTGAGCTCCACACAGGCATTAGCCGATTATGCCACTCTCATCATTGATTTGAAGAAGAATTTGTCAGCAACTGATTCTCCCGTTGTGGTGTTTGGAGGATCCTATGGAGGAATGCTGGCAGCTTGGTTCAGGATGAAGTATCCACACGTTGCAATTGGAGCTCTGGCATCCTCTGCTCCCATTCTCCATTTCATGGATTTGGTTTCACCAGATATCTTCAACAGCATCATCTCGCAAGATTTCAGAAGCGAGAGTGAGAATTGTTACAAAGTGTTAAAAGGGTCATGGAAACTAATAGAGCACACAGCCAACAAACCCGGGGGACTGGAACTGTTACAGAAATCATTCAGAATTTGCAAAAGCAATGATTTTGGGGCAGGTTCTCTGGAAGGATGGCTTAGGACGGCGTGGGTTTATACGGCTATGACAGATTATCCCACACCATCCAATTTCCTCAATCCCTTGCCAGCATATCCCATAAAAAAGATGTGTGAGGCCATAGAAGGGACAAAAAAGGAAAAAAATGACGAATTGGAGAAGTTGTATGCAGCAGTGAGTGTATTCTACAACCATACAGGCACTGCCACGTGTTTCGACTTGGATGATGATTCAGACCCGCACGATCTCGGGGGATGGCAATGGCAGGCGTGTACGGAGATGATAATGCCCGTAGGTGGAAGCAATAAGCACAGCATATTCCCAGAATATAAGTGGTCATACGAAGACAGAGAGTCAGCGTGCCAATTTTTCTACAATGTTACGCCTAGACCACACTGGATTACCACTGAGTTTGGTGGCCATGCTATTCAGACAGTTCTGAAAAGCTCTGCAAGCAACATTATATTCTTCAATGGTTTAAGAGATCCTTGGAGTGGTGGAGGGGTGTTAAAGAATATATCAAAATCAATAGTTGCTCTTGTTGAAAAAAGAGGAGCTCATCATGTAGACTTAAGGTACTCCACTAAGGAAGATCCAAAGTGGCTTAAAGATGTAAGGAGACAGGAGGTAAACATCATTGCAAGTTGGATCTCACAATACTATCAAGACCTACACTCCAATAACTAA 1530 0.4301 MAFELHFTLIFFSLFSVSSFTFPLPPILPRFPSSIVSAELKQRSHSAPNTPYKTKFFTQILDHFNFNPQSNHVFQQRYLINDTFWGGAKNNAPIFVYTGNEGNIEWFTQNTGFMFENAPSFHALLLFIEHRFYGKSIPFGGNRKVAYANATTLGYLSSTQALADYATLIIDLKKNLSATDSPVVVFGGSYGGMLAAWFRMKYPHVAIGALASSAPILHFMDLVSPDIFNSIISQDFRSESENCYKVLKGSWKLIEHTANKPGGLELLQKSFRICKSNDFGAGSLEGWLRTAWVYTAMTDYPTPSNFLNPLPAYPIKKMCEAIEGTKKEKNDELEKLYAAVSVFYNHTGTATCFDLDDDSDPHDLGGWQWQACTEMIMPVGGSNKHSIFPEYKWSYEDRESACQFFYNVTPRPHWITTEFGGHAIQTVLKSSASNIIFFNGLRDPWSGGGVLKNISKSIVALVEKRGAHHVDLRYSTKEDPKWLKDVRRQEVNIIASWISQYYQDLHSNN* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0577 509 Gene3D Serine carboxypeptidase S28, SKS domain 224 392 IPR042269 -
Vra3g0577 509 Gene3D alpha/beta hydrolase 56 498 IPR029058 -
Vra3g0577 509 Coils Coil 319 339 - -
Vra3g0577 509 SUPERFAMILY alpha/beta-Hydrolases 111 472 IPR029058 -
Vra3g0577 509 Pfam Serine carboxypeptidase S28 59 488 IPR008758 GO:0006508|GO:0008236
Vra3g0577 509 PANTHER LYSOSOMAL PRO-X CARBOXYPEPTIDASE-LIKE PROTEIN 3 506 - -
Vra3g0577 509 PANTHER PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED 3 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0577 Vra-Chr3 6356105 6360408 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0577 K01285 - gmx:100781698 876.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0577 3 6356105 6360408 Vra3g0577 3 6356105 6360408 ECH