Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0572 ATGTCTCAGACCAAGAAATTGACGCCGAATCTGGATCAGCAGAGCACGAAGGTGCTGAATCTAACGGTGCTCCAGCGAATCGATCCATTCATCGACGAGATTCTCTTCACCGCCGCTCATGTCTCCTTCTACGACTTCAACATCGAAACCAACCAGTGGAGTCGCAAGGATGTCGAAGGATCTCTCTTCGTTGTCAAGAGGAATTCACAGCCACGGTTTCAGTTTATCGTGATGAATCGACGAAGTACAGATAACCTTGTGGAGAATCTATTGGATTTTGAGTATGAACTTAAAAGCCCGTACCTATTATATCGGAATGCTGCTCAAGAAGTTAATGGTATATGGTTTTATAATCCAGACGAATGCGAGGAAGTTGCAAATCTTTTTAACAGGATACTTAATTTGTACCCAAAGGCACCTCCAACTACCACAACGCCTGCTAACAGAAGTGAGTTTGAGGAACATCAGCCAGTGTCAGTGATATCAAGAAGCCCTCTAGAATCGTCTTCAGCTGCTGCTTCTGCAATTGATGCCGTTGAAGATGCTGTATTTTCAAACTTTTGCACCGTATATGATGTTACATTGAAGGATACTAGAAGTTATGCTCCCGCTATAAAAAATGGTAGACAGAATTCTACTTCTATCACTTCTGCTGCTCCTAGTGGTTTATTTTCTCCTGCACCTACTGTCCAAATACCAGCTTCTCATTCAACTTCATCTATATCAGGCTTACCTGTTGACTCTCTTGAAACAGTCAAGAATGGAAATCAAGCCATTAATCTCGTTAAGCCTTCTACTTTTTTCACATCCACTTCATCATCACTGTTAGTTCCACCTATTTCTTCATCTGTGCTACCTAGTTCAGTTGGTAATCATTCCCTGAATATGCCACGACCATATGGCACACCAGTACTTCAACCCTTCCCGCCCCCTATTCCTCCTCTCTCTCTTACACCCATTTCAAGCTCTAAACCTGTAATTGGAAGGGATAGCGTTCGCAATGCACTTTTATCATTGGTTCAGGATGATCAATTCATTGACATGATGTTCCAGGCATTACTGAAGGTGAGTCCTTCATGA 1080 0.4259 MSQTKKLTPNLDQQSTKVLNLTVLQRIDPFIDEILFTAAHVSFYDFNIETNQWSRKDVEGSLFVVKRNSQPRFQFIVMNRRSTDNLVENLLDFEYELKSPYLLYRNAAQEVNGIWFYNPDECEEVANLFNRILNLYPKAPPTTTTPANRSEFEEHQPVSVISRSPLESSSAAASAIDAVEDAVFSNFCTVYDVTLKDTRSYAPAIKNGRQNSTSITSAAPSGLFSPAPTVQIPASHSTSSISGLPVDSLETVKNGNQAINLVKPSTFFTSTSSSLLVPPISSSVLPSSVGNHSLNMPRPYGTPVLQPFPPPIPPLSLTPISSSKPVIGRDSVRNALLSLVQDDQFIDMMFQALLKVSPS* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0572 359 Gene3D - 7 135 IPR011993 -
Vra3g0572 359 PANTHER TRANSCRIPTION FACTOR SMIF DECAPPING ENZYME DCP1 1 356 IPR010334 GO:0000290|GO:0008047|GO:0043085
Vra3g0572 359 Pfam Dcp1-like decapping family 17 130 IPR010334 GO:0000290|GO:0008047|GO:0043085
Vra3g0572 359 PANTHER DECAPPING ENZYME 1A, PUTATIVE-RELATED 1 356 - -
Vra3g0572 359 SUPERFAMILY PH domain-like 19 138 - -
Vra3g0572 359 CDD EVH1-like_Dcp1 19 133 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0572 K12611 - gmx:100786833 466.848