Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0571 ATGGCGGAGATTTTGGACGGTGCAATTCGGCGAGCTGTTGTGATCGGTAACGGGTTCGCTGGCGCTGAGAATCAGTGCATTGGTTTGGTTCGTGCTCTTGGTTTCTCCAACCGCCACACCATATACCGTGTCACGAGGCCTCGAGGAGGAATCAATCGGTGGCTTCAATGGCTTCCGGTTTCGGTTCACAAAAAGTTAGAGTCCGTTGTTAGAATGAGCTGTGGCAAATCGAGCTTGCGAACGCCTCACACTATCGGCTTATCCAACGTGTTGGAAGCTGATGCTCACCACCTTGCCACCATGGCTCGCGAAACGTTTCACAAAGGCGGACCCTTGTTGGTGGTTGCATCTGGACGAGACACCATTTCTGTTGCCAGCTCCATTAAACGGTTAGCTCCAGAAAATGTTTTTCTAGTTCAGATACAACATCCAAGATTTCACCTGAATAGGTTTGATCTTGTGATCACTCCACGCCATGATTATTACCCGCAGACTCCACACGCCCAGCAGCAAATACCTTGGTTTCTTCGAAGGTGGGTGACTCCATGGGAACCTCCAGGCCGCAATGTGGTCCTCACTGTGGGAGCACTTCATCAAGCTGATTCCGCTGCTCTTAGGATTGCCGCTTCTGCCTGGCATAAGGAGTTAGGAACTCTACCAAAGCCCTTGCTTGTGGTTAATGTTGGGGGACCTACTGGCAATTGTCCCTATGGTGTAGATCTTGTAAAGAAGTTAGTGGTTATGCTTCAGAGTGTTCTGTGGAGTTGTGGGAGTATCAGGATATCTTTCTCCAGAAGAACTCCTGACAAGGTACAAATGATTATGCAATCAATCAGAAAAATTTTGGTTAAAGAACTTTCCACAAATCCCAAGGTCCAAATATGGGACGGTGAAGGTCCAAATCCACATATGGGACATCTAGCCTGGGCTGATGCCTTTGTTATCACAGCTGATTCAGTTAGTATGTTGAGTGAGGCCTGCAGTACTGGGAAGCCTGTGTATGTAGTTGGAGCAGAGCTGTGTACTTGGAAGTTTGCTGACTTCCAAAATTCTTTGCAAAAACATGGGGTAGCTCGACCATTCACTGGAAAGCAGAATATAACCGAAAGCTGGAGTTATCCTCCACTGAATGACACTGCAGAGGCTTCACGCCAAGTAATTGCTGCTCTTGCTCAGCGAGGATGGACCATACACCCATAA 1200 0.48 MAEILDGAIRRAVVIGNGFAGAENQCIGLVRALGFSNRHTIYRVTRPRGGINRWLQWLPVSVHKKLESVVRMSCGKSSLRTPHTIGLSNVLEADAHHLATMARETFHKGGPLLVVASGRDTISVASSIKRLAPENVFLVQIQHPRFHLNRFDLVITPRHDYYPQTPHAQQQIPWFLRRWVTPWEPPGRNVVLTVGALHQADSAALRIAASAWHKELGTLPKPLLVVNVGGPTGNCPYGVDLVKKLVVMLQSVLWSCGSIRISFSRRTPDKVQMIMQSIRKILVKELSTNPKVQIWDGEGPNPHMGHLAWADAFVITADSVSMLSEACSTGKPVYVVGAELCTWKFADFQNSLQKHGVARPFTGKQNITESWSYPPLNDTAEASRQVIAALAQRGWTIHP* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0571 399 PANTHER OS02G0535700 PROTEIN 7 398 IPR009367 -
Vra3g0571 399 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 110 337 - -
Vra3g0571 399 PANTHER MITOCHONDRIAL FISSION PROTEIN ELM1 7 398 - -
Vra3g0571 399 Pfam Mitochondrial fission ELM1 20 390 IPR009367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0571 Vra-Chr3 6304191 6309425 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0571 - - gmx:100801126 714.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0571 3 6304191 6309425 Vra3g0571 3 6304191 6309425 ECH