Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0567 ATGTTTTCAGCTAGCATTTTGCTTCAGATTCTGGCATGTGCAATATATAACAATTGGTGGCCCATGTTATCAGCTCTGATGTATGTGCTTGTACCTATGCCTTGCTTATTCTTTGGAGGTGGATCGACTCAATTTCTAATGAGCCGTGATGGTGGGGGTTGGATAGATGCTGCAAAATTTTTGACTGGAGCATCAGCCGTTGGGAGCATAGCCATTCCTATAATCCTCAAGCATGCACATATGATTGAGACAGGCGCGATGCTCATTGAGCTTGTATCGTTCTTCATATTTATATGCACTGTTTTATGTTTCCACCAAGCCAACCTTGATGATGATTGGTAA 342 0.4211 MFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLMSRDGGGWIDAAKFLTGASAVGSIAIPIILKHAHMIETGAMLIELVSFFIFICTVLCFHQANLDDDW* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0567 113 PANTHER LEPTIN RECEPTOR-RELATED 1 112 IPR007262 -
Vra3g0567 113 Pfam Vacuolar protein sorting 55 2 107 IPR007262 -
Vra3g0567 113 PANTHER RH04491P 1 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g0567 Vra-Chr3 6264364 6266880 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g0567 1 104 EF-hand Containing Proteins AT1G32410 57.692 3.00e-39 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0567 - - gmx:100800586 233.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0567 3 6264364 6266880 Vra3g0567 3 6264364 6266880 ECH