Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0559 ATGCTCAGAGGGAACATTGCAACCGAAGTTAGGTTTTGGTTTTGGTACTTTCGTGAAGTGAACCAAATTTTCTTTGCTACTGTTATCTTTCATCTCACCACCATGAGCAGATCAGGGCAACCACCGGATTTGAAGAAGTACATGGACAAGAAGCTTCAGATTAAACTGAATGCTAATCGCATGATCGTTGGTACTCTCCGTGGCTTTGATCAGTTTATGAATTTAGTTGTTGACAACACCGTGGAAGTGAATGGCAATGAGAAAACTGACATAGGGATGGTGGTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCCGTGAACAGAACCTGA 342 0.4298 MLRGNIATEVRFWFWYFREVNQIFFATVIFHLTTMSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVVDNTVEVNGNEKTDIGMVVIRGNSVVTVEALEPVNRT* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0559 113 SMART Sm3 42 106 IPR001163 -
Vra3g0559 113 Pfam LSM domain 43 105 IPR001163 -
Vra3g0559 113 SUPERFAMILY Sm-like ribonucleoproteins 43 110 IPR010920 -
Vra3g0559 113 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN G 20 113 - -
Vra3g0559 113 CDD Sm_G 40 108 IPR034098 GO:0000387|GO:0005681
Vra3g0559 113 Gene3D - 32 112 - -
Vra3g0559 113 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN 20 113 IPR044641 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0559 K11099 - gmx:100305530 155.606
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0559 3 6181579 6183242 Vra3g0559 3 6181579 6183242 ECH