Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g0553 ATGTCGGGGAAGAGAAAGAGGAAGTTGAAATTGCTAAGCGACACAATCACAGACAATAGAAGGTCAGTTGATGAGATGAAAAGTGAACATTTGGAGCTGCAATCCTGGGCTGATCTCCCTGCTGAACTCTTAGAACTAATCTTGTCCCGATTGATCCTTGCTGATAATATCCGTGCTTCTTCTGTTTGCAAGAGATGGCATTCTGTTGCTAGTGATGTCCGTGTAGTAAGCCAATCACCATGGCTTATGTATTTTCCAAAATTTGGTGACTGTTATGAATTCTATGATCCTGTGCAGCGTAAGACCTACACCCTTGAGTTGCCAGAGTTGAATGGATCCAGAGTTTGTTATACAAAAGATGGTTGGTTGTTGCTATACCGGCCCCGAACTCACCGAGTATTCTTCTTCAATCCCTTTACTCGGGAGCTGATAAAACTGCCAAGATTTGAGATGACATACCAGATTGTTGCCTTCTCTTGTGCTCCAACGTCACCTGACTGTGTGTTGTTTACTGTTAAGCATGTTAGTCCAACTGTTGTGGCTATTAGCACTTGTTATCCTGGGGCGACAGAATGGACCACTATTAATCACCCAAACCGCTTACCCTTTGTCAGTAGCATTTGGAATAAGCTTGTGTTTTGTAATGGGTTATTTTATTGTTTGAGCCTCACAGGTTGGCTTGGGGTGTTTGACCCGGTTGAATGTATTTGGAGTGTTCTAGCAGTACCTCCACCTAAATGCCCAGAGAATTTTTTTGCCAAAAACTGGTGGAAGGGGAAATTTATGACAGAGCACGGAGGAGATATATTAGTAATCTATACATGCTGTAGTGAGAACCCCATTATTTTCAAGTTAGATCAGACATTAATGAAATGGGAAGAAATGAGAACTCTAGATGGAGTGACTCTTTTTGCTAGTTTTTTGTCTTCTCATTCCAGGACCGACCTCATTGGAGTAATGAGGAACAATGTCTACTTCTCTAAAGTTCGTTTCTATGGGAAGCGTTGCATATCATTCTCTCTTGATGACTATAGATACTATCCCCGTAAACAGTGTCATGACTGGGGAGAACAAGATCCTTTTGAGAACATCTGGATTGAGCCACCAAAGGACTTTTCGGCTTGCATGTGA 1131 0.4209 MSGKRKRKLKLLSDTITDNRRSVDEMKSEHLELQSWADLPAELLELILSRLILADNIRASSVCKRWHSVASDVRVVSQSPWLMYFPKFGDCYEFYDPVQRKTYTLELPELNGSRVCYTKDGWLLLYRPRTHRVFFFNPFTRELIKLPRFEMTYQIVAFSCAPTSPDCVLFTVKHVSPTVVAISTCYPGATEWTTINHPNRLPFVSSIWNKLVFCNGLFYCLSLTGWLGVFDPVECIWSVLAVPPPKCPENFFAKNWWKGKFMTEHGGDILVIYTCCSENPIIFKLDQTLMKWEEMRTLDGVTLFASFLSSHSRTDLIGVMRNNVYFSKVRFYGKRCISFSLDDYRYYPRKQCHDWGEQDPFENIWIEPPKDFSACM* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g0553 376 SUPERFAMILY F-box domain 30 128 IPR036047 GO:0005515
Vra3g0553 376 PANTHER OS09G0392200 PROTEIN 6 372 IPR044619 -
Vra3g0553 376 Gene3D - 35 75 - -
Vra3g0553 376 Pfam F-box-like 36 72 IPR001810 GO:0005515
Vra3g0553 376 PANTHER OS09G0392200 PROTEIN 6 372 - -
Vra3g0553 376 SMART fbox_2 39 79 IPR001810 GO:0005515
Vra3g0553 376 ProSiteProfiles F-box domain profile. 33 84 IPR001810 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g0553 - - gmx:100796538 740.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0553 3 6137998 6141835 Vra3g0553 3 6137998 6141835 ECH